Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC23.07■■□□□ 1.28
CCDC141Q6ZP82 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
CCDC141Q6ZP82 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC23.07■■□□□ 1.28
CCDC141Q6ZP82 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC23.07■■□□□ 1.28
CCDC141Q6ZP82 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC23.07■■□□□ 1.28
CCDC141Q6ZP82 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
CCDC141Q6ZP82 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CCDC141Q6ZP82 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CCDC141Q6ZP82 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CCDC141Q6ZP82 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CCDC141Q6ZP82 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC23.06■■□□□ 1.28
CCDC141Q6ZP82 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
CCDC141Q6ZP82 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
CCDC141Q6ZP82 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CCDC141Q6ZP82 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC23.06■■□□□ 1.28
CCDC141Q6ZP82 ATP6V0CP2-201ENST00000469409 207 ntBASIC23.06■■□□□ 1.28
CCDC141Q6ZP82 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC23.06■■□□□ 1.28
CCDC141Q6ZP82 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC23.06■■□□□ 1.28
CCDC141Q6ZP82 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC23.06■■□□□ 1.28
CCDC141Q6ZP82 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC23.06■■□□□ 1.28
CCDC141Q6ZP82 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC23.06■■□□□ 1.28
CCDC141Q6ZP82 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC23.06■■□□□ 1.28
CCDC141Q6ZP82 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
CCDC141Q6ZP82 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CCDC141Q6ZP82 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC23.06■■□□□ 1.28
CCDC141Q6ZP82 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC23.06■■□□□ 1.28
CCDC141Q6ZP82 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CCDC141Q6ZP82 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CCDC141Q6ZP82 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CCDC141Q6ZP82 AC127383.1-201ENST00000444697 1800 ntBASIC23.06■■□□□ 1.28
CCDC141Q6ZP82 NKILA-202ENST00000614771 2598 ntBASIC23.06■■□□□ 1.28
CCDC141Q6ZP82 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
CCDC141Q6ZP82 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CCDC141Q6ZP82 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CCDC141Q6ZP82 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CCDC141Q6ZP82 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CCDC141Q6ZP82 HNRNPA1P63-201ENST00000427917 963 ntBASIC23.05■■□□□ 1.28
CCDC141Q6ZP82 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CCDC141Q6ZP82 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC23.05■■□□□ 1.28
CCDC141Q6ZP82 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC23.05■■□□□ 1.28
CCDC141Q6ZP82 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CCDC141Q6ZP82 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC23.05■■□□□ 1.28
CCDC141Q6ZP82 AC007663.3-201ENST00000609632 465 ntBASIC23.05■■□□□ 1.28
CCDC141Q6ZP82 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
CCDC141Q6ZP82 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
CCDC141Q6ZP82 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CCDC141Q6ZP82 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
CCDC141Q6ZP82 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC23.05■■□□□ 1.28
CCDC141Q6ZP82 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CCDC141Q6ZP82 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CCDC141Q6ZP82 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC23.05■■□□□ 1.28
CCDC141Q6ZP82 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CCDC141Q6ZP82 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC23.05■■□□□ 1.28
CCDC141Q6ZP82 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
CCDC141Q6ZP82 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC23.05■■□□□ 1.28
CCDC141Q6ZP82 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC23.05■■□□□ 1.28
CCDC141Q6ZP82 NKAIN1P1-201ENST00000435754 582 ntBASIC23.05■■□□□ 1.28
CCDC141Q6ZP82 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC23.05■■□□□ 1.28
CCDC141Q6ZP82 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC23.05■■□□□ 1.28
CCDC141Q6ZP82 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CCDC141Q6ZP82 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC23.05■■□□□ 1.28
CCDC141Q6ZP82 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
CCDC141Q6ZP82 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC23.05■■□□□ 1.28
CCDC141Q6ZP82 DUX4L47-201ENST00000566374 394 ntBASIC23.05■■□□□ 1.28
CCDC141Q6ZP82 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC23.05■■□□□ 1.28
CCDC141Q6ZP82 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCDC141Q6ZP82 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC23.04■■□□□ 1.28
CCDC141Q6ZP82 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CCDC141Q6ZP82 KRT8P19-201ENST00000551916 1455 ntBASIC23.04■■□□□ 1.28
CCDC141Q6ZP82 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
CCDC141Q6ZP82 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCDC141Q6ZP82 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC23.04■■□□□ 1.28
CCDC141Q6ZP82 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC23.04■■□□□ 1.28
CCDC141Q6ZP82 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCDC141Q6ZP82 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC23.04■■□□□ 1.28
CCDC141Q6ZP82 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCDC141Q6ZP82 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC23.04■■□□□ 1.28
CCDC141Q6ZP82 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
CCDC141Q6ZP82 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCDC141Q6ZP82 AL662890.1-201ENST00000396818 632 ntBASIC23.04■■□□□ 1.28
CCDC141Q6ZP82 EIF4HP1-201ENST00000453115 687 ntBASIC23.04■■□□□ 1.28
CCDC141Q6ZP82 AC022616.1-201ENST00000518688 554 ntBASIC23.04■■□□□ 1.28
CCDC141Q6ZP82 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC23.04■■□□□ 1.28
CCDC141Q6ZP82 NAT9-222ENST00000583476 583 ntTSL 3 BASIC23.04■■□□□ 1.28
CCDC141Q6ZP82 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC23.04■■□□□ 1.28
CCDC141Q6ZP82 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCDC141Q6ZP82 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCDC141Q6ZP82 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CCDC141Q6ZP82 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
CCDC141Q6ZP82 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC23.03■■□□□ 1.28
CCDC141Q6ZP82 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCDC141Q6ZP82 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCDC141Q6ZP82 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CCDC141Q6ZP82 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCDC141Q6ZP82 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC23.03■■□□□ 1.28
CCDC141Q6ZP82 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC23.03■■□□□ 1.28
CCDC141Q6ZP82 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CCDC141Q6ZP82 AC055811.4-201ENST00000624039 1754 ntBASIC23.03■■□□□ 1.28
CCDC141Q6ZP82 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCDC141Q6ZP82 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC23.03■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms