Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTR9Q6PD62 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CTR9Q6PD62 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTR9Q6PD62 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC18.71■□□□□ 0.59
CTR9Q6PD62 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTR9Q6PD62 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTR9Q6PD62 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CTR9Q6PD62 PKIG-203ENST00000372887 769 ntTSL 3 BASIC18.71■□□□□ 0.59
CTR9Q6PD62 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC18.71■□□□□ 0.59
CTR9Q6PD62 PTPA-220ENST00000436883 532 ntTSL 4 BASIC18.71■□□□□ 0.59
CTR9Q6PD62 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
CTR9Q6PD62 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC18.71■□□□□ 0.59
CTR9Q6PD62 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC18.71■□□□□ 0.59
CTR9Q6PD62 TMEM261P1-201ENST00000604899 340 ntBASIC18.71■□□□□ 0.59
CTR9Q6PD62 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CTR9Q6PD62 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
CTR9Q6PD62 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CTR9Q6PD62 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
CTR9Q6PD62 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTR9Q6PD62 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC18.71■□□□□ 0.59
CTR9Q6PD62 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CTR9Q6PD62 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTR9Q6PD62 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CTR9Q6PD62 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CTR9Q6PD62 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTR9Q6PD62 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC18.71■□□□□ 0.59
CTR9Q6PD62 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTR9Q6PD62 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CTR9Q6PD62 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CTR9Q6PD62 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC18.71■□□□□ 0.59
CTR9Q6PD62 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CTR9Q6PD62 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CTR9Q6PD62 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CTR9Q6PD62 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC18.7■□□□□ 0.58
CTR9Q6PD62 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC18.7■□□□□ 0.58
CTR9Q6PD62 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTR9Q6PD62 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTR9Q6PD62 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTR9Q6PD62 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC18.7■□□□□ 0.58
CTR9Q6PD62 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTR9Q6PD62 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CTR9Q6PD62 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTR9Q6PD62 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTR9Q6PD62 AC098614.1-201ENST00000368528 745 ntBASIC18.7■□□□□ 0.58
CTR9Q6PD62 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CTR9Q6PD62 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTR9Q6PD62 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CTR9Q6PD62 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTR9Q6PD62 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
CTR9Q6PD62 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC18.7■□□□□ 0.58
CTR9Q6PD62 GALT-202ENST00000450095 1280 ntTSL 2 BASIC18.7■□□□□ 0.58
CTR9Q6PD62 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC18.7■□□□□ 0.58
CTR9Q6PD62 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTR9Q6PD62 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC18.7■□□□□ 0.58
CTR9Q6PD62 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CTR9Q6PD62 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC18.7■□□□□ 0.58
CTR9Q6PD62 AC239800.4-201ENST00000603712 296 ntBASIC18.7■□□□□ 0.58
CTR9Q6PD62 CU639417.3-201ENST00000624240 1404 ntBASIC18.7■□□□□ 0.58
CTR9Q6PD62 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC18.7■□□□□ 0.58
CTR9Q6PD62 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CTR9Q6PD62 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTR9Q6PD62 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CTR9Q6PD62 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC18.7■□□□□ 0.58
CTR9Q6PD62 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC18.7■□□□□ 0.58
CTR9Q6PD62 PKD1P5-201ENST00000532415 10291 ntBASIC18.7■□□□□ 0.58
CTR9Q6PD62 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CTR9Q6PD62 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTR9Q6PD62 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CTR9Q6PD62 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CTR9Q6PD62 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTR9Q6PD62 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTR9Q6PD62 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTR9Q6PD62 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTR9Q6PD62 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CTR9Q6PD62 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CTR9Q6PD62 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CTR9Q6PD62 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTR9Q6PD62 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CTR9Q6PD62 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTR9Q6PD62 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CTR9Q6PD62 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC18.69■□□□□ 0.58
CTR9Q6PD62 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC18.69■□□□□ 0.58
CTR9Q6PD62 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CTR9Q6PD62 AC092552.1-201ENST00000547243 906 ntBASIC18.69■□□□□ 0.58
CTR9Q6PD62 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC18.69■□□□□ 0.58
CTR9Q6PD62 WFDC1-204ENST00000613603 549 ntBASIC18.69■□□□□ 0.58
CTR9Q6PD62 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CTR9Q6PD62 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CTR9Q6PD62 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTR9Q6PD62 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CTR9Q6PD62 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTR9Q6PD62 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTR9Q6PD62 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC18.69■□□□□ 0.58
CTR9Q6PD62 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CTR9Q6PD62 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CTR9Q6PD62 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CTR9Q6PD62 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTR9Q6PD62 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTR9Q6PD62 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTR9Q6PD62 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms