Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CNKSR3Q6P9H4 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC16.76■□□□□ 0.27
CNKSR3Q6P9H4 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNKSR3Q6P9H4 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.76■□□□□ 0.27
CNKSR3Q6P9H4 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.76■□□□□ 0.27
CNKSR3Q6P9H4 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CNKSR3Q6P9H4 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNKSR3Q6P9H4 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CNKSR3Q6P9H4 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNKSR3Q6P9H4 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNKSR3Q6P9H4 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNKSR3Q6P9H4 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CNKSR3Q6P9H4 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.76■□□□□ 0.27
CNKSR3Q6P9H4 NDUFAB1P1-201ENST00000404262 460 ntBASIC16.76■□□□□ 0.27
CNKSR3Q6P9H4 FAM8A4P-201ENST00000435433 1213 ntBASIC16.76■□□□□ 0.27
CNKSR3Q6P9H4 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CNKSR3Q6P9H4 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC16.76■□□□□ 0.27
CNKSR3Q6P9H4 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC16.76■□□□□ 0.27
CNKSR3Q6P9H4 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
CNKSR3Q6P9H4 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.76■□□□□ 0.27
CNKSR3Q6P9H4 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNKSR3Q6P9H4 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNKSR3Q6P9H4 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.76■□□□□ 0.27
CNKSR3Q6P9H4 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CNKSR3Q6P9H4 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNKSR3Q6P9H4 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CNKSR3Q6P9H4 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CNKSR3Q6P9H4 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CNKSR3Q6P9H4 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNKSR3Q6P9H4 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CNKSR3Q6P9H4 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
CNKSR3Q6P9H4 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.76■□□□□ 0.27
CNKSR3Q6P9H4 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.76■□□□□ 0.27
CNKSR3Q6P9H4 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.76■□□□□ 0.27
CNKSR3Q6P9H4 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CNKSR3Q6P9H4 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNKSR3Q6P9H4 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNKSR3Q6P9H4 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CNKSR3Q6P9H4 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CNKSR3Q6P9H4 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNKSR3Q6P9H4 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNKSR3Q6P9H4 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.75■□□□□ 0.27
CNKSR3Q6P9H4 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNKSR3Q6P9H4 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CNKSR3Q6P9H4 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNKSR3Q6P9H4 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CNKSR3Q6P9H4 TISP43-201ENST00000409793 538 ntTSL 4 BASIC16.75■□□□□ 0.27
CNKSR3Q6P9H4 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC16.75■□□□□ 0.27
CNKSR3Q6P9H4 KRTAP19-9P-201ENST00000421795 191 ntBASIC16.75■□□□□ 0.27
CNKSR3Q6P9H4 HNRNPA1P63-201ENST00000427917 963 ntBASIC16.75■□□□□ 0.27
CNKSR3Q6P9H4 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNKSR3Q6P9H4 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC16.75■□□□□ 0.27
CNKSR3Q6P9H4 RN7SL769P-201ENST00000469386 295 ntBASIC16.75■□□□□ 0.27
CNKSR3Q6P9H4 ATP6V0CP2-201ENST00000469409 207 ntBASIC16.75■□□□□ 0.27
CNKSR3Q6P9H4 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.75■□□□□ 0.27
CNKSR3Q6P9H4 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CNKSR3Q6P9H4 AC007663.3-201ENST00000609632 465 ntBASIC16.75■□□□□ 0.27
CNKSR3Q6P9H4 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNKSR3Q6P9H4 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNKSR3Q6P9H4 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
CNKSR3Q6P9H4 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CNKSR3Q6P9H4 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNKSR3Q6P9H4 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CNKSR3Q6P9H4 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.75■□□□□ 0.27
CNKSR3Q6P9H4 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNKSR3Q6P9H4 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNKSR3Q6P9H4 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNKSR3Q6P9H4 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNKSR3Q6P9H4 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.74■□□□□ 0.27
CNKSR3Q6P9H4 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CNKSR3Q6P9H4 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CNKSR3Q6P9H4 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.74■□□□□ 0.27
CNKSR3Q6P9H4 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.74■□□□□ 0.27
CNKSR3Q6P9H4 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CNKSR3Q6P9H4 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
CNKSR3Q6P9H4 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.74■□□□□ 0.27
CNKSR3Q6P9H4 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CNKSR3Q6P9H4 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CNKSR3Q6P9H4 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CNKSR3Q6P9H4 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CNKSR3Q6P9H4 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CNKSR3Q6P9H4 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CNKSR3Q6P9H4 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.74■□□□□ 0.27
CNKSR3Q6P9H4 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CNKSR3Q6P9H4 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CNKSR3Q6P9H4 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CNKSR3Q6P9H4 AL645937.2-201ENST00000396808 931 ntBASIC16.74■□□□□ 0.27
CNKSR3Q6P9H4 AL139094.1-201ENST00000405549 1188 ntBASIC16.74■□□□□ 0.27
CNKSR3Q6P9H4 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC16.74■□□□□ 0.27
CNKSR3Q6P9H4 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
CNKSR3Q6P9H4 COX5BP1-201ENST00000507622 393 ntBASIC16.74■□□□□ 0.27
CNKSR3Q6P9H4 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC16.74■□□□□ 0.27
CNKSR3Q6P9H4 CHMP4BP1-201ENST00000556017 588 ntBASIC16.74■□□□□ 0.27
CNKSR3Q6P9H4 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC16.74■□□□□ 0.27
CNKSR3Q6P9H4 KLK11-210ENST00000600362 759 ntTSL 3 BASIC16.74■□□□□ 0.27
CNKSR3Q6P9H4 AC138649.2-201ENST00000615886 705 ntBASIC16.74■□□□□ 0.27
CNKSR3Q6P9H4 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CNKSR3Q6P9H4 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.74■□□□□ 0.27
CNKSR3Q6P9H4 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CNKSR3Q6P9H4 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms