Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM53Q6P2H8 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.6□□□□□ -0.07
TMEM53Q6P2H8 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.6□□□□□ -0.07
TMEM53Q6P2H8 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM53Q6P2H8 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM53Q6P2H8 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM53Q6P2H8 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.6□□□□□ -0.07
TMEM53Q6P2H8 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.6□□□□□ -0.07
TMEM53Q6P2H8 HMGA1P7-201ENST00000406908 502 ntBASIC14.6□□□□□ -0.07
TMEM53Q6P2H8 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.6□□□□□ -0.07
TMEM53Q6P2H8 KRT18P2-201ENST00000447938 1258 ntBASIC14.6□□□□□ -0.07
TMEM53Q6P2H8 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
TMEM53Q6P2H8 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM53Q6P2H8 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.6□□□□□ -0.07
TMEM53Q6P2H8 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM53Q6P2H8 KRT19P2-202ENST00000557173 1012 ntBASIC14.6□□□□□ -0.07
TMEM53Q6P2H8 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC14.6□□□□□ -0.07
TMEM53Q6P2H8 AL031055.1-201ENST00000606362 631 ntBASIC14.6□□□□□ -0.07
TMEM53Q6P2H8 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.6□□□□□ -0.07
TMEM53Q6P2H8 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM53Q6P2H8 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
TMEM53Q6P2H8 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
TMEM53Q6P2H8 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.6□□□□□ -0.07
TMEM53Q6P2H8 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
TMEM53Q6P2H8 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.6□□□□□ -0.07
TMEM53Q6P2H8 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
TMEM53Q6P2H8 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.6□□□□□ -0.07
TMEM53Q6P2H8 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM53Q6P2H8 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.6□□□□□ -0.07
TMEM53Q6P2H8 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.6□□□□□ -0.07
TMEM53Q6P2H8 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM53Q6P2H8 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM53Q6P2H8 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM53Q6P2H8 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
TMEM53Q6P2H8 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM53Q6P2H8 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM53Q6P2H8 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.59□□□□□ -0.07
TMEM53Q6P2H8 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM53Q6P2H8 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM53Q6P2H8 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM53Q6P2H8 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM53Q6P2H8 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
TMEM53Q6P2H8 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM53Q6P2H8 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.59□□□□□ -0.07
TMEM53Q6P2H8 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM53Q6P2H8 LINC00552-201ENST00000625151 2579 ntBASIC14.59□□□□□ -0.07
TMEM53Q6P2H8 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM53Q6P2H8 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM53Q6P2H8 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.59□□□□□ -0.07
TMEM53Q6P2H8 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
TMEM53Q6P2H8 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.59□□□□□ -0.07
TMEM53Q6P2H8 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.59□□□□□ -0.07
TMEM53Q6P2H8 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM53Q6P2H8 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM53Q6P2H8 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.59□□□□□ -0.07
TMEM53Q6P2H8 MIR574-201ENST00000385209 96 ntBASIC14.59□□□□□ -0.07
TMEM53Q6P2H8 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.59□□□□□ -0.07
TMEM53Q6P2H8 PMS2P4-201ENST00000412466 1052 ntBASIC14.59□□□□□ -0.07
TMEM53Q6P2H8 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
TMEM53Q6P2H8 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.59□□□□□ -0.07
TMEM53Q6P2H8 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC14.59□□□□□ -0.07
TMEM53Q6P2H8 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.59□□□□□ -0.07
TMEM53Q6P2H8 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.59□□□□□ -0.07
TMEM53Q6P2H8 AC040169.1-201ENST00000565382 521 ntBASIC14.59□□□□□ -0.07
TMEM53Q6P2H8 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.59□□□□□ -0.07
TMEM53Q6P2H8 AC021097.1-201ENST00000607902 574 ntBASIC14.59□□□□□ -0.07
TMEM53Q6P2H8 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.59□□□□□ -0.07
TMEM53Q6P2H8 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM53Q6P2H8 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM53Q6P2H8 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.59□□□□□ -0.07
TMEM53Q6P2H8 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.59□□□□□ -0.07
TMEM53Q6P2H8 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
TMEM53Q6P2H8 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM53Q6P2H8 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM53Q6P2H8 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM53Q6P2H8 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM53Q6P2H8 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM53Q6P2H8 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM53Q6P2H8 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM53Q6P2H8 HLA-A-202ENST00000376806 1854 ntBASIC14.59□□□□□ -0.07
TMEM53Q6P2H8 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.59□□□□□ -0.07
TMEM53Q6P2H8 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.59□□□□□ -0.07
TMEM53Q6P2H8 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM53Q6P2H8 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.58□□□□□ -0.07
TMEM53Q6P2H8 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
TMEM53Q6P2H8 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
TMEM53Q6P2H8 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC14.58□□□□□ -0.07
TMEM53Q6P2H8 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.58□□□□□ -0.07
TMEM53Q6P2H8 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TMEM53Q6P2H8 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
TMEM53Q6P2H8 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TMEM53Q6P2H8 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
TMEM53Q6P2H8 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
TMEM53Q6P2H8 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM53Q6P2H8 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM53Q6P2H8 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM53Q6P2H8 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM53Q6P2H8 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM53Q6P2H8 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
TMEM53Q6P2H8 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms