Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC15.35■□□□□ 0.05
LYSMD4Q5XG99 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LYSMD4Q5XG99 CSH2-202ENST00000345366 598 ntTSL 5 BASIC15.35■□□□□ 0.05
LYSMD4Q5XG99 AL662890.1-201ENST00000396818 632 ntBASIC15.35■□□□□ 0.05
LYSMD4Q5XG99 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.35■□□□□ 0.05
LYSMD4Q5XG99 ACTBP8-201ENST00000403258 1108 ntBASIC15.35■□□□□ 0.05
LYSMD4Q5XG99 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.35■□□□□ 0.05
LYSMD4Q5XG99 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
LYSMD4Q5XG99 BX284668.4-201ENST00000453917 508 ntBASIC15.35■□□□□ 0.05
LYSMD4Q5XG99 ADM-202ENST00000524948 584 ntTSL 2 BASIC15.35■□□□□ 0.05
LYSMD4Q5XG99 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.35■□□□□ 0.05
LYSMD4Q5XG99 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LYSMD4Q5XG99 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC15.35■□□□□ 0.05
LYSMD4Q5XG99 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.35■□□□□ 0.05
LYSMD4Q5XG99 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC15.35■□□□□ 0.05
LYSMD4Q5XG99 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.35■□□□□ 0.05
LYSMD4Q5XG99 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LYSMD4Q5XG99 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LYSMD4Q5XG99 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LYSMD4Q5XG99 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.35■□□□□ 0.05
LYSMD4Q5XG99 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LYSMD4Q5XG99 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LYSMD4Q5XG99 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
LYSMD4Q5XG99 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
LYSMD4Q5XG99 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
LYSMD4Q5XG99 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
LYSMD4Q5XG99 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LYSMD4Q5XG99 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LYSMD4Q5XG99 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
LYSMD4Q5XG99 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
LYSMD4Q5XG99 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LYSMD4Q5XG99 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LYSMD4Q5XG99 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LYSMD4Q5XG99 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
LYSMD4Q5XG99 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LYSMD4Q5XG99 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LYSMD4Q5XG99 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
LYSMD4Q5XG99 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LYSMD4Q5XG99 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.34■□□□□ 0.05
LYSMD4Q5XG99 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
LYSMD4Q5XG99 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
LYSMD4Q5XG99 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
LYSMD4Q5XG99 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
LYSMD4Q5XG99 MIR648-201ENST00000385046 94 ntBASIC15.34■□□□□ 0.05
LYSMD4Q5XG99 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC15.34■□□□□ 0.05
LYSMD4Q5XG99 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.34■□□□□ 0.05
LYSMD4Q5XG99 KLF2P2-201ENST00000416807 1039 ntBASIC15.34■□□□□ 0.05
LYSMD4Q5XG99 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC15.34■□□□□ 0.05
LYSMD4Q5XG99 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC15.34■□□□□ 0.05
LYSMD4Q5XG99 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC15.34■□□□□ 0.05
LYSMD4Q5XG99 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC15.34■□□□□ 0.05
LYSMD4Q5XG99 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC15.34■□□□□ 0.05
LYSMD4Q5XG99 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC15.34■□□□□ 0.05
LYSMD4Q5XG99 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.34■□□□□ 0.05
LYSMD4Q5XG99 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC15.34■□□□□ 0.05
LYSMD4Q5XG99 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.34■□□□□ 0.05
LYSMD4Q5XG99 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC15.34■□□□□ 0.05
LYSMD4Q5XG99 RERG-205ENST00000537647 935 ntTSL 2 BASIC15.34■□□□□ 0.05
LYSMD4Q5XG99 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC15.34■□□□□ 0.05
LYSMD4Q5XG99 RN7SL48P-201ENST00000579283 293 ntBASIC15.34■□□□□ 0.05
LYSMD4Q5XG99 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
LYSMD4Q5XG99 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
LYSMD4Q5XG99 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LYSMD4Q5XG99 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LYSMD4Q5XG99 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
LYSMD4Q5XG99 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.34■□□□□ 0.05
LYSMD4Q5XG99 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LYSMD4Q5XG99 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LYSMD4Q5XG99 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LYSMD4Q5XG99 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.34■□□□□ 0.05
LYSMD4Q5XG99 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
LYSMD4Q5XG99 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.34■□□□□ 0.05
LYSMD4Q5XG99 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.34■□□□□ 0.05
LYSMD4Q5XG99 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LYSMD4Q5XG99 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
LYSMD4Q5XG99 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LYSMD4Q5XG99 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
LYSMD4Q5XG99 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.33■□□□□ 0.05
LYSMD4Q5XG99 AC006449.6-201ENST00000612330 2296 ntBASIC15.33■□□□□ 0.05
LYSMD4Q5XG99 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
LYSMD4Q5XG99 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
LYSMD4Q5XG99 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LYSMD4Q5XG99 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LYSMD4Q5XG99 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
LYSMD4Q5XG99 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
LYSMD4Q5XG99 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
LYSMD4Q5XG99 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LYSMD4Q5XG99 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LYSMD4Q5XG99 RNU1-114P-201ENST00000365297 166 ntBASIC15.33■□□□□ 0.04
LYSMD4Q5XG99 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LYSMD4Q5XG99 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.04
LYSMD4Q5XG99 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC15.33■□□□□ 0.04
LYSMD4Q5XG99 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC15.33■□□□□ 0.04
LYSMD4Q5XG99 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC15.33■□□□□ 0.04
LYSMD4Q5XG99 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
LYSMD4Q5XG99 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC15.33■□□□□ 0.04
LYSMD4Q5XG99 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.33■□□□□ 0.04
LYSMD4Q5XG99 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC15.33■□□□□ 0.04
LYSMD4Q5XG99 AC114812.1-204ENST00000449669 728 ntBASIC15.33■□□□□ 0.04
LYSMD4Q5XG99 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms