Protein–RNA interactions for Protein: Q5VWM5

PRAMEF9, PRAME family member 9/15, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF9Q5VWM5 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
PRAMEF9Q5VWM5 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.18■□□□□ 0.02
PRAMEF9Q5VWM5 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PRAMEF9Q5VWM5 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PRAMEF9Q5VWM5 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PRAMEF9Q5VWM5 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.18■□□□□ 0.02
PRAMEF9Q5VWM5 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.18■□□□□ 0.02
PRAMEF9Q5VWM5 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.18■□□□□ 0.02
PRAMEF9Q5VWM5 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.18■□□□□ 0.02
PRAMEF9Q5VWM5 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.18■□□□□ 0.02
PRAMEF9Q5VWM5 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PRAMEF9Q5VWM5 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.18■□□□□ 0.02
PRAMEF9Q5VWM5 AC097493.3-201ENST00000509725 367 ntBASIC15.18■□□□□ 0.02
PRAMEF9Q5VWM5 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PRAMEF9Q5VWM5 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.18■□□□□ 0.02
PRAMEF9Q5VWM5 DUX4L27-201ENST00000554796 1261 ntBASIC15.18■□□□□ 0.02
PRAMEF9Q5VWM5 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.18■□□□□ 0.02
PRAMEF9Q5VWM5 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.18■□□□□ 0.02
PRAMEF9Q5VWM5 AF228730.6-201ENST00000641497 218 ntBASIC15.18■□□□□ 0.02
PRAMEF9Q5VWM5 AC084121.3-201ENST00000641716 218 ntBASIC15.18■□□□□ 0.02
PRAMEF9Q5VWM5 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.18■□□□□ 0.02
PRAMEF9Q5VWM5 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PRAMEF9Q5VWM5 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PRAMEF9Q5VWM5 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PRAMEF9Q5VWM5 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PRAMEF9Q5VWM5 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PRAMEF9Q5VWM5 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
PRAMEF9Q5VWM5 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
PRAMEF9Q5VWM5 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
PRAMEF9Q5VWM5 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
PRAMEF9Q5VWM5 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
PRAMEF9Q5VWM5 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.18■□□□□ 0.02
PRAMEF9Q5VWM5 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PRAMEF9Q5VWM5 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.17■□□□□ 0.02
PRAMEF9Q5VWM5 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.17■□□□□ 0.02
PRAMEF9Q5VWM5 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PRAMEF9Q5VWM5 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PRAMEF9Q5VWM5 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
PRAMEF9Q5VWM5 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PRAMEF9Q5VWM5 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PRAMEF9Q5VWM5 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PRAMEF9Q5VWM5 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.17■□□□□ 0.02
PRAMEF9Q5VWM5 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.17■□□□□ 0.02
PRAMEF9Q5VWM5 KRT8P44-201ENST00000441609 1350 ntBASIC15.17■□□□□ 0.02
PRAMEF9Q5VWM5 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PRAMEF9Q5VWM5 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
PRAMEF9Q5VWM5 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PRAMEF9Q5VWM5 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.17■□□□□ 0.02
PRAMEF9Q5VWM5 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.17■□□□□ 0.02
PRAMEF9Q5VWM5 TREML5P-201ENST00000421694 576 ntBASIC15.17■□□□□ 0.02
PRAMEF9Q5VWM5 AC107890.1-201ENST00000422478 521 ntBASIC15.17■□□□□ 0.02
PRAMEF9Q5VWM5 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.17■□□□□ 0.02
PRAMEF9Q5VWM5 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.17■□□□□ 0.02
PRAMEF9Q5VWM5 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PRAMEF9Q5VWM5 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PRAMEF9Q5VWM5 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PRAMEF9Q5VWM5 AC069120.2-201ENST00000524091 540 ntBASIC15.17■□□□□ 0.02
PRAMEF9Q5VWM5 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.17■□□□□ 0.02
PRAMEF9Q5VWM5 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC15.17■□□□□ 0.02
PRAMEF9Q5VWM5 LINC01115-203ENST00000606068 577 ntBASIC15.17■□□□□ 0.02
PRAMEF9Q5VWM5 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.17■□□□□ 0.02
PRAMEF9Q5VWM5 MIR6069-201ENST00000620069 79 ntBASIC15.17■□□□□ 0.02
PRAMEF9Q5VWM5 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.17■□□□□ 0.02
PRAMEF9Q5VWM5 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PRAMEF9Q5VWM5 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PRAMEF9Q5VWM5 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PRAMEF9Q5VWM5 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PRAMEF9Q5VWM5 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PRAMEF9Q5VWM5 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PRAMEF9Q5VWM5 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.17■□□□□ 0.02
PRAMEF9Q5VWM5 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.17■□□□□ 0.02
PRAMEF9Q5VWM5 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.17■□□□□ 0.02
PRAMEF9Q5VWM5 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PRAMEF9Q5VWM5 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.17■□□□□ 0.02
PRAMEF9Q5VWM5 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PRAMEF9Q5VWM5 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRAMEF9Q5VWM5 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.16■□□□□ 0.02
PRAMEF9Q5VWM5 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRAMEF9Q5VWM5 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.16■□□□□ 0.02
PRAMEF9Q5VWM5 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.16■□□□□ 0.02
PRAMEF9Q5VWM5 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRAMEF9Q5VWM5 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRAMEF9Q5VWM5 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.16■□□□□ 0.02
PRAMEF9Q5VWM5 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRAMEF9Q5VWM5 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.16■□□□□ 0.02
PRAMEF9Q5VWM5 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRAMEF9Q5VWM5 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRAMEF9Q5VWM5 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRAMEF9Q5VWM5 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.16■□□□□ 0.02
PRAMEF9Q5VWM5 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
PRAMEF9Q5VWM5 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRAMEF9Q5VWM5 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
PRAMEF9Q5VWM5 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
PRAMEF9Q5VWM5 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
PRAMEF9Q5VWM5 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
PRAMEF9Q5VWM5 TSSK5P-201ENST00000423978 907 ntBASIC15.16■□□□□ 0.02
PRAMEF9Q5VWM5 RPL13P2-201ENST00000440687 659 ntBASIC15.16■□□□□ 0.02
PRAMEF9Q5VWM5 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.16■□□□□ 0.02
PRAMEF9Q5VWM5 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC15.16■□□□□ 0.02
PRAMEF9Q5VWM5 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms