Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
VPS13DQ5THJ4 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
VPS13DQ5THJ4 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC10.33□□□□□ -0.76
VPS13DQ5THJ4 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC10.33□□□□□ -0.76
VPS13DQ5THJ4 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC10.33□□□□□ -0.76
VPS13DQ5THJ4 AC138894.2-201ENST00000602838 371 ntBASIC10.33□□□□□ -0.76
VPS13DQ5THJ4 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
VPS13DQ5THJ4 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC10.33□□□□□ -0.76
VPS13DQ5THJ4 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
VPS13DQ5THJ4 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC10.33□□□□□ -0.76
VPS13DQ5THJ4 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
VPS13DQ5THJ4 AC144522.1-201ENST00000625111 1658 ntBASIC10.33□□□□□ -0.76
VPS13DQ5THJ4 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
VPS13DQ5THJ4 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
VPS13DQ5THJ4 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC10.33□□□□□ -0.76
VPS13DQ5THJ4 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC10.33□□□□□ -0.76
VPS13DQ5THJ4 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC10.33□□□□□ -0.76
VPS13DQ5THJ4 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC10.33□□□□□ -0.76
VPS13DQ5THJ4 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
VPS13DQ5THJ4 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
VPS13DQ5THJ4 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
VPS13DQ5THJ4 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
VPS13DQ5THJ4 AK6-201ENST00000380818 1183 ntTSL 2 BASIC10.33□□□□□ -0.76
VPS13DQ5THJ4 MIR648-201ENST00000385046 94 ntBASIC10.33□□□□□ -0.76
VPS13DQ5THJ4 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC10.33□□□□□ -0.76
VPS13DQ5THJ4 MARK2P5-201ENST00000507649 634 ntBASIC10.33□□□□□ -0.76
VPS13DQ5THJ4 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC10.33□□□□□ -0.76
VPS13DQ5THJ4 AC007663.3-201ENST00000609632 465 ntBASIC10.33□□□□□ -0.76
VPS13DQ5THJ4 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC10.33□□□□□ -0.76
VPS13DQ5THJ4 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC10.33□□□□□ -0.76
VPS13DQ5THJ4 E2F3P2-201ENST00000447755 1422 ntBASIC10.33□□□□□ -0.76
VPS13DQ5THJ4 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC10.33□□□□□ -0.76
VPS13DQ5THJ4 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC10.33□□□□□ -0.76
VPS13DQ5THJ4 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC10.33□□□□□ -0.76
VPS13DQ5THJ4 ANKRD30BP2-201ENST00000435744 1610 ntBASIC10.33□□□□□ -0.76
VPS13DQ5THJ4 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC10.33□□□□□ -0.76
VPS13DQ5THJ4 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC10.33□□□□□ -0.76
VPS13DQ5THJ4 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
VPS13DQ5THJ4 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
VPS13DQ5THJ4 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
VPS13DQ5THJ4 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC10.33□□□□□ -0.76
VPS13DQ5THJ4 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
VPS13DQ5THJ4 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC10.33□□□□□ -0.76
VPS13DQ5THJ4 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
VPS13DQ5THJ4 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
VPS13DQ5THJ4 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
VPS13DQ5THJ4 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC10.33□□□□□ -0.76
VPS13DQ5THJ4 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
VPS13DQ5THJ4 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
VPS13DQ5THJ4 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC10.33□□□□□ -0.76
VPS13DQ5THJ4 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC10.33□□□□□ -0.76
VPS13DQ5THJ4 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC10.33□□□□□ -0.76
VPS13DQ5THJ4 AC112504.1-201ENST00000623415 1841 ntBASIC10.33□□□□□ -0.76
VPS13DQ5THJ4 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC10.33□□□□□ -0.76
VPS13DQ5THJ4 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
VPS13DQ5THJ4 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC10.33□□□□□ -0.76
VPS13DQ5THJ4 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC10.33□□□□□ -0.76
VPS13DQ5THJ4 PCDHA12-202ENST00000613593 2588 ntBASIC10.33□□□□□ -0.76
VPS13DQ5THJ4 CRCP-204ENST00000398684 492 ntTSL 2 BASIC10.33□□□□□ -0.76
VPS13DQ5THJ4 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
VPS13DQ5THJ4 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC10.33□□□□□ -0.76
VPS13DQ5THJ4 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC10.33□□□□□ -0.76
VPS13DQ5THJ4 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC10.33□□□□□ -0.76
VPS13DQ5THJ4 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC10.33□□□□□ -0.76
VPS13DQ5THJ4 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC10.32□□□□□ -0.76
VPS13DQ5THJ4 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
VPS13DQ5THJ4 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
VPS13DQ5THJ4 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
VPS13DQ5THJ4 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
VPS13DQ5THJ4 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
VPS13DQ5THJ4 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC10.32□□□□□ -0.76
VPS13DQ5THJ4 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
VPS13DQ5THJ4 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC10.32□□□□□ -0.76
VPS13DQ5THJ4 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC10.32□□□□□ -0.76
VPS13DQ5THJ4 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
VPS13DQ5THJ4 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
VPS13DQ5THJ4 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
VPS13DQ5THJ4 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
VPS13DQ5THJ4 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC10.32□□□□□ -0.76
VPS13DQ5THJ4 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC10.32□□□□□ -0.76
VPS13DQ5THJ4 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC10.32□□□□□ -0.76
VPS13DQ5THJ4 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
VPS13DQ5THJ4 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC10.32□□□□□ -0.76
VPS13DQ5THJ4 RPL18P13-201ENST00000478088 569 ntBASIC10.32□□□□□ -0.76
VPS13DQ5THJ4 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC10.32□□□□□ -0.76
VPS13DQ5THJ4 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC10.32□□□□□ -0.76
VPS13DQ5THJ4 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
VPS13DQ5THJ4 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC10.32□□□□□ -0.76
VPS13DQ5THJ4 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC10.32□□□□□ -0.76
VPS13DQ5THJ4 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
VPS13DQ5THJ4 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
VPS13DQ5THJ4 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC10.32□□□□□ -0.76
VPS13DQ5THJ4 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC10.32□□□□□ -0.76
VPS13DQ5THJ4 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC10.32□□□□□ -0.76
VPS13DQ5THJ4 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
VPS13DQ5THJ4 INE2-201ENST00000630399 1874 ntBASIC10.32□□□□□ -0.76
VPS13DQ5THJ4 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
VPS13DQ5THJ4 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC10.32□□□□□ -0.76
VPS13DQ5THJ4 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
VPS13DQ5THJ4 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms