Protein–RNA interactions for Protein: Q5MAI5

CDKL4, Cyclin-dependent kinase-like 4, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL4Q5MAI5 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKL4Q5MAI5 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.31■□□□□ 0.04
CDKL4Q5MAI5 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
CDKL4Q5MAI5 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDKL4Q5MAI5 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKL4Q5MAI5 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKL4Q5MAI5 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKL4Q5MAI5 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CDKL4Q5MAI5 AC138035.3-201ENST00000622706 2791 ntBASIC15.3■□□□□ 0.04
CDKL4Q5MAI5 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.3■□□□□ 0.04
CDKL4Q5MAI5 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKL4Q5MAI5 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKL4Q5MAI5 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CDKL4Q5MAI5 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKL4Q5MAI5 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKL4Q5MAI5 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.3■□□□□ 0.04
CDKL4Q5MAI5 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKL4Q5MAI5 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDKL4Q5MAI5 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDKL4Q5MAI5 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CDKL4Q5MAI5 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CDKL4Q5MAI5 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKL4Q5MAI5 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKL4Q5MAI5 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.3■□□□□ 0.04
CDKL4Q5MAI5 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.3■□□□□ 0.04
CDKL4Q5MAI5 MIR1233-2-201ENST00000408138 82 ntBASIC15.3■□□□□ 0.04
CDKL4Q5MAI5 MIR1233-1-201ENST00000408722 82 ntBASIC15.3■□□□□ 0.04
CDKL4Q5MAI5 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.3■□□□□ 0.04
CDKL4Q5MAI5 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.3■□□□□ 0.04
CDKL4Q5MAI5 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
CDKL4Q5MAI5 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.3■□□□□ 0.04
CDKL4Q5MAI5 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDKL4Q5MAI5 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.3■□□□□ 0.04
CDKL4Q5MAI5 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDKL4Q5MAI5 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.3■□□□□ 0.04
CDKL4Q5MAI5 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC15.3■□□□□ 0.04
CDKL4Q5MAI5 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.3■□□□□ 0.04
CDKL4Q5MAI5 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDKL4Q5MAI5 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.3■□□□□ 0.04
CDKL4Q5MAI5 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.3■□□□□ 0.04
CDKL4Q5MAI5 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.3■□□□□ 0.04
CDKL4Q5MAI5 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.3■□□□□ 0.04
CDKL4Q5MAI5 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.3■□□□□ 0.04
CDKL4Q5MAI5 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CDKL4Q5MAI5 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CDKL4Q5MAI5 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
CDKL4Q5MAI5 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKL4Q5MAI5 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
CDKL4Q5MAI5 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.3■□□□□ 0.04
CDKL4Q5MAI5 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.3■□□□□ 0.04
CDKL4Q5MAI5 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.3■□□□□ 0.04
CDKL4Q5MAI5 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.3■□□□□ 0.04
CDKL4Q5MAI5 AL596442.2-201ENST00000610240 980 ntBASIC15.3■□□□□ 0.04
CDKL4Q5MAI5 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKL4Q5MAI5 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.3■□□□□ 0.04
CDKL4Q5MAI5 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.3■□□□□ 0.04
CDKL4Q5MAI5 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CDKL4Q5MAI5 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKL4Q5MAI5 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKL4Q5MAI5 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CDKL4Q5MAI5 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDKL4Q5MAI5 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDKL4Q5MAI5 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CDKL4Q5MAI5 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDKL4Q5MAI5 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CDKL4Q5MAI5 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDKL4Q5MAI5 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDKL4Q5MAI5 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CDKL4Q5MAI5 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDKL4Q5MAI5 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDKL4Q5MAI5 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CDKL4Q5MAI5 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDKL4Q5MAI5 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDKL4Q5MAI5 TUBB3P1-201ENST00000405796 1332 ntBASIC15.29■□□□□ 0.04
CDKL4Q5MAI5 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDKL4Q5MAI5 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDKL4Q5MAI5 AL139400.1-201ENST00000366220 510 ntBASIC15.29■□□□□ 0.04
CDKL4Q5MAI5 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.29■□□□□ 0.04
CDKL4Q5MAI5 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDKL4Q5MAI5 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.29■□□□□ 0.04
CDKL4Q5MAI5 AC074338.1-201ENST00000416825 156 ntBASIC15.29■□□□□ 0.04
CDKL4Q5MAI5 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.29■□□□□ 0.04
CDKL4Q5MAI5 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.29■□□□□ 0.04
CDKL4Q5MAI5 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC15.29■□□□□ 0.04
CDKL4Q5MAI5 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDKL4Q5MAI5 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDKL4Q5MAI5 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.29■□□□□ 0.04
CDKL4Q5MAI5 AC067863.1-201ENST00000494933 530 ntBASIC15.29■□□□□ 0.04
CDKL4Q5MAI5 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.29■□□□□ 0.04
CDKL4Q5MAI5 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.29■□□□□ 0.04
CDKL4Q5MAI5 ZNF890P-202ENST00000530367 1156 ntBASIC15.29■□□□□ 0.04
CDKL4Q5MAI5 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.29■□□□□ 0.04
CDKL4Q5MAI5 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.29■□□□□ 0.04
CDKL4Q5MAI5 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.29■□□□□ 0.04
CDKL4Q5MAI5 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDKL4Q5MAI5 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDKL4Q5MAI5 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.29■□□□□ 0.04
CDKL4Q5MAI5 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDKL4Q5MAI5 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CDKL4Q5MAI5 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms