Protein–RNA interactions for Protein: Q567U6

CCDC93, Coiled-coil domain-containing protein 93, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93Q567U6 MIR663B-201ENST00000408361 115 ntBASIC19.26■□□□□ 0.67
CCDC93Q567U6 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC93Q567U6 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC19.26■□□□□ 0.67
CCDC93Q567U6 RPSAP36-202ENST00000494591 1261 ntBASIC19.26■□□□□ 0.67
CCDC93Q567U6 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC19.26■□□□□ 0.67
CCDC93Q567U6 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC93Q567U6 AC015910.1-201ENST00000579400 975 ntBASIC19.26■□□□□ 0.67
CCDC93Q567U6 EEF1DP1-201ENST00000585891 896 ntBASIC19.26■□□□□ 0.67
CCDC93Q567U6 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC19.26■□□□□ 0.67
CCDC93Q567U6 AC016629.1-201ENST00000596579 586 ntBASIC19.26■□□□□ 0.67
CCDC93Q567U6 AC097359.3-201ENST00000603982 1210 ntBASIC19.26■□□□□ 0.67
CCDC93Q567U6 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC93Q567U6 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC93Q567U6 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
CCDC93Q567U6 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC93Q567U6 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CCDC93Q567U6 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC93Q567U6 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC93Q567U6 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC93Q567U6 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC93Q567U6 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC93Q567U6 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC93Q567U6 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC93Q567U6 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC93Q567U6 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC93Q567U6 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CCDC93Q567U6 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC93Q567U6 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC93Q567U6 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC93Q567U6 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC93Q567U6 AL138709.1-201ENST00000614840 1693 ntBASIC19.25■□□□□ 0.67
CCDC93Q567U6 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC93Q567U6 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC93Q567U6 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC93Q567U6 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC93Q567U6 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC93Q567U6 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CCDC93Q567U6 AL662890.1-201ENST00000396818 632 ntBASIC19.25■□□□□ 0.67
CCDC93Q567U6 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC93Q567U6 MIR1202-201ENST00000408529 83 ntBASIC19.25■□□□□ 0.67
CCDC93Q567U6 FNTAP2-201ENST00000430308 634 ntBASIC19.25■□□□□ 0.67
CCDC93Q567U6 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC93Q567U6 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC19.25■□□□□ 0.67
CCDC93Q567U6 ADM-202ENST00000524948 584 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC93Q567U6 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC19.25■□□□□ 0.67
CCDC93Q567U6 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC93Q567U6 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC19.25■□□□□ 0.67
CCDC93Q567U6 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC93Q567U6 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CCDC93Q567U6 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
CCDC93Q567U6 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC93Q567U6 AC132938.4-201ENST00000623835 848 ntBASIC19.25■□□□□ 0.67
CCDC93Q567U6 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC93Q567U6 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC93Q567U6 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC93Q567U6 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC19.25■□□□□ 0.67
CCDC93Q567U6 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC93Q567U6 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC93Q567U6 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC93Q567U6 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC93Q567U6 AC015818.8-201ENST00000587907 1519 ntBASIC19.25■□□□□ 0.67
CCDC93Q567U6 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC93Q567U6 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC93Q567U6 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CCDC93Q567U6 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC93Q567U6 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC93Q567U6 AC134407.2-201ENST00000625089 1978 ntBASIC19.24■□□□□ 0.67
CCDC93Q567U6 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CCDC93Q567U6 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC93Q567U6 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC93Q567U6 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC93Q567U6 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CCDC93Q567U6 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC93Q567U6 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CCDC93Q567U6 OR6D1P-202ENST00000641007 5290 ntBASIC19.24■□□□□ 0.67
CCDC93Q567U6 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
CCDC93Q567U6 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
CCDC93Q567U6 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CCDC93Q567U6 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC93Q567U6 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC93Q567U6 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC93Q567U6 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC19.24■□□□□ 0.67
CCDC93Q567U6 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC93Q567U6 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC19.24■□□□□ 0.67
CCDC93Q567U6 RERG-205ENST00000537647 935 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC93Q567U6 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC93Q567U6 AC105129.2-201ENST00000559536 390 ntBASIC19.24■□□□□ 0.67
CCDC93Q567U6 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC93Q567U6 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC19.24■□□□□ 0.67
CCDC93Q567U6 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC93Q567U6 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CCDC93Q567U6 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC93Q567U6 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC93Q567U6 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC19.24■□□□□ 0.67
CCDC93Q567U6 TP73-209ENST00000603362 1668 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC93Q567U6 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC93Q567U6 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC93Q567U6 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC93Q567U6 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC93Q567U6 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms