Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CTC1Q2NKJ3 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTC1Q2NKJ3 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.84■□□□□ 0.29
CTC1Q2NKJ3 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CTC1Q2NKJ3 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTC1Q2NKJ3 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTC1Q2NKJ3 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.84■□□□□ 0.29
CTC1Q2NKJ3 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CTC1Q2NKJ3 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.29
CTC1Q2NKJ3 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.83■□□□□ 0.29
CTC1Q2NKJ3 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CTC1Q2NKJ3 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CTC1Q2NKJ3 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CTC1Q2NKJ3 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTC1Q2NKJ3 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CTC1Q2NKJ3 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTC1Q2NKJ3 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTC1Q2NKJ3 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTC1Q2NKJ3 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.83■□□□□ 0.28
CTC1Q2NKJ3 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CTC1Q2NKJ3 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTC1Q2NKJ3 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CTC1Q2NKJ3 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.83■□□□□ 0.28
CTC1Q2NKJ3 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CTC1Q2NKJ3 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTC1Q2NKJ3 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.83■□□□□ 0.28
CTC1Q2NKJ3 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CTC1Q2NKJ3 AL391256.1-201ENST00000443260 1855 ntBASIC16.83■□□□□ 0.28
CTC1Q2NKJ3 AL355864.2-201ENST00000447420 863 ntBASIC16.83■□□□□ 0.28
CTC1Q2NKJ3 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.83■□□□□ 0.28
CTC1Q2NKJ3 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTC1Q2NKJ3 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.83■□□□□ 0.28
CTC1Q2NKJ3 FTH1P14-201ENST00000482930 551 ntBASIC16.83■□□□□ 0.28
CTC1Q2NKJ3 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CTC1Q2NKJ3 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC16.83■□□□□ 0.28
CTC1Q2NKJ3 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTC1Q2NKJ3 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC16.83■□□□□ 0.28
CTC1Q2NKJ3 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC16.83■□□□□ 0.28
CTC1Q2NKJ3 ALOX12P2-203ENST00000570921 1945 ntBASIC16.83■□□□□ 0.28
CTC1Q2NKJ3 RN7SL190P-201ENST00000582519 257 ntBASIC16.83■□□□□ 0.28
CTC1Q2NKJ3 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.83■□□□□ 0.28
CTC1Q2NKJ3 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTC1Q2NKJ3 MIR4321-201ENST00000592276 80 ntBASIC16.83■□□□□ 0.28
CTC1Q2NKJ3 AC106872.11-201ENST00000605838 421 ntBASIC16.83■□□□□ 0.28
CTC1Q2NKJ3 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC16.83■□□□□ 0.28
CTC1Q2NKJ3 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.83■□□□□ 0.28
CTC1Q2NKJ3 MTHFR-217ENST00000641820 1569 ntBASIC16.83■□□□□ 0.28
CTC1Q2NKJ3 AL031731.1-201ENST00000642131 2094 ntBASIC16.83■□□□□ 0.28
CTC1Q2NKJ3 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTC1Q2NKJ3 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.82■□□□□ 0.28
CTC1Q2NKJ3 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTC1Q2NKJ3 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTC1Q2NKJ3 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTC1Q2NKJ3 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTC1Q2NKJ3 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.82■□□□□ 0.28
CTC1Q2NKJ3 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.82■□□□□ 0.28
CTC1Q2NKJ3 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.82■□□□□ 0.28
CTC1Q2NKJ3 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTC1Q2NKJ3 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CTC1Q2NKJ3 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CTC1Q2NKJ3 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.82■□□□□ 0.28
CTC1Q2NKJ3 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CTC1Q2NKJ3 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC16.82■□□□□ 0.28
CTC1Q2NKJ3 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC16.82■□□□□ 0.28
CTC1Q2NKJ3 AC026954.1-201ENST00000429771 1293 ntBASIC16.82■□□□□ 0.28
CTC1Q2NKJ3 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.82■□□□□ 0.28
CTC1Q2NKJ3 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CTC1Q2NKJ3 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC16.82■□□□□ 0.28
CTC1Q2NKJ3 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.82■□□□□ 0.28
CTC1Q2NKJ3 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CTC1Q2NKJ3 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC16.82■□□□□ 0.28
CTC1Q2NKJ3 RN7SL560P-201ENST00000577943 264 ntBASIC16.82■□□□□ 0.28
CTC1Q2NKJ3 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC16.82■□□□□ 0.28
CTC1Q2NKJ3 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
CTC1Q2NKJ3 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC16.82■□□□□ 0.28
CTC1Q2NKJ3 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CTC1Q2NKJ3 AC009542.2-202ENST00000619004 1067 ntBASIC16.82■□□□□ 0.28
CTC1Q2NKJ3 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
CTC1Q2NKJ3 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTC1Q2NKJ3 AC126177.1-201ENST00000547829 2218 ntBASIC16.82■□□□□ 0.28
CTC1Q2NKJ3 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTC1Q2NKJ3 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.82■□□□□ 0.28
CTC1Q2NKJ3 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CTC1Q2NKJ3 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTC1Q2NKJ3 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CTC1Q2NKJ3 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTC1Q2NKJ3 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CTC1Q2NKJ3 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.82■□□□□ 0.28
CTC1Q2NKJ3 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.82■□□□□ 0.28
CTC1Q2NKJ3 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.82■□□□□ 0.28
CTC1Q2NKJ3 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTC1Q2NKJ3 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTC1Q2NKJ3 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTC1Q2NKJ3 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CTC1Q2NKJ3 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.82■□□□□ 0.28
CTC1Q2NKJ3 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CTC1Q2NKJ3 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTC1Q2NKJ3 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTC1Q2NKJ3 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.81■□□□□ 0.28
CTC1Q2NKJ3 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms