Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CCNA1P78396 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC17.81■□□□□ 0.44
CCNA1P78396 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC17.81■□□□□ 0.44
CCNA1P78396 OARD1-212ENST00000482515 832 ntTSL 2 BASIC17.81■□□□□ 0.44
CCNA1P78396 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.81■□□□□ 0.44
CCNA1P78396 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC17.81■□□□□ 0.44
CCNA1P78396 AC006453.4-201ENST00000636949 1252 ntBASIC17.81■□□□□ 0.44
CCNA1P78396 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
CCNA1P78396 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCNA1P78396 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCNA1P78396 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CCNA1P78396 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCNA1P78396 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCNA1P78396 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC17.81■□□□□ 0.44
CCNA1P78396 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CCNA1P78396 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC17.8■□□□□ 0.44
CCNA1P78396 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCNA1P78396 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCNA1P78396 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCNA1P78396 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCNA1P78396 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCNA1P78396 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC17.8■□□□□ 0.44
CCNA1P78396 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
CCNA1P78396 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCNA1P78396 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCNA1P78396 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.8■□□□□ 0.44
CCNA1P78396 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCNA1P78396 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCNA1P78396 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCNA1P78396 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCNA1P78396 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CCNA1P78396 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCNA1P78396 MIR1202-201ENST00000408529 83 ntBASIC17.8■□□□□ 0.44
CCNA1P78396 NUS1P3-201ENST00000423502 862 ntBASIC17.8■□□□□ 0.44
CCNA1P78396 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC17.8■□□□□ 0.44
CCNA1P78396 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC17.8■□□□□ 0.44
CCNA1P78396 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CCNA1P78396 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCNA1P78396 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC17.8■□□□□ 0.44
CCNA1P78396 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CCNA1P78396 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC17.8■□□□□ 0.44
CCNA1P78396 HNRNPA1P48-202ENST00000565308 961 ntBASIC17.8■□□□□ 0.44
CCNA1P78396 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC17.8■□□□□ 0.44
CCNA1P78396 MIR4741-201ENST00000579822 90 ntBASIC17.8■□□□□ 0.44
CCNA1P78396 TBCB-211ENST00000589996 724 ntTSL 3 BASIC17.8■□□□□ 0.44
CCNA1P78396 UBL5-208ENST00000593087 320 ntTSL 3 BASIC17.8■□□□□ 0.44
CCNA1P78396 KLK3-211ENST00000597483 810 ntTSL 2 BASIC17.8■□□□□ 0.44
CCNA1P78396 GPR39-203ENST00000622084 900 ntTSL 5 BASIC17.8■□□□□ 0.44
CCNA1P78396 AC244452.3-201ENST00000636814 210 ntBASIC17.8■□□□□ 0.44
CCNA1P78396 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCNA1P78396 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CCNA1P78396 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCNA1P78396 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCNA1P78396 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.8■□□□□ 0.44
CCNA1P78396 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CCNA1P78396 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.8■□□□□ 0.44
CCNA1P78396 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCNA1P78396 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCNA1P78396 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC17.8■□□□□ 0.44
CCNA1P78396 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCNA1P78396 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCNA1P78396 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCNA1P78396 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCNA1P78396 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
CCNA1P78396 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCNA1P78396 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.79■□□□□ 0.44
CCNA1P78396 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.79■□□□□ 0.44
CCNA1P78396 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CCNA1P78396 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCNA1P78396 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCNA1P78396 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CCNA1P78396 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC17.79■□□□□ 0.44
CCNA1P78396 CALR4P-201ENST00000431943 946 ntBASIC17.79■□□□□ 0.44
CCNA1P78396 AC007969.1-201ENST00000433675 447 ntBASIC17.79■□□□□ 0.44
CCNA1P78396 MTX1P1-201ENST00000440904 838 ntBASIC17.79■□□□□ 0.44
CCNA1P78396 AC114812.1-204ENST00000449669 728 ntBASIC17.79■□□□□ 0.44
CCNA1P78396 AL591846.1-201ENST00000451736 433 ntBASIC17.79■□□□□ 0.44
CCNA1P78396 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CCNA1P78396 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC17.79■□□□□ 0.44
CCNA1P78396 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC17.79■□□□□ 0.44
CCNA1P78396 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCNA1P78396 AL008638.5-201ENST00000623814 1298 ntBASIC17.79■□□□□ 0.44
CCNA1P78396 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC17.79■□□□□ 0.44
CCNA1P78396 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCNA1P78396 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCNA1P78396 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.79■□□□□ 0.44
CCNA1P78396 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCNA1P78396 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CCNA1P78396 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCNA1P78396 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCNA1P78396 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCNA1P78396 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CCNA1P78396 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.79■□□□□ 0.44
CCNA1P78396 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCNA1P78396 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCNA1P78396 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCNA1P78396 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
CCNA1P78396 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCNA1P78396 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.78■□□□□ 0.44
CCNA1P78396 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms