Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
UBE2D3P61077 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
UBE2D3P61077 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC11.31□□□□□ -0.6
UBE2D3P61077 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
UBE2D3P61077 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
UBE2D3P61077 BSG-215ENST00000618006 1329 ntTSL 2 BASIC11.31□□□□□ -0.6
UBE2D3P61077 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
UBE2D3P61077 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
UBE2D3P61077 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
UBE2D3P61077 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
UBE2D3P61077 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC11.31□□□□□ -0.6
UBE2D3P61077 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
UBE2D3P61077 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
UBE2D3P61077 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
UBE2D3P61077 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2D3P61077 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC11.3□□□□□ -0.6
UBE2D3P61077 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2D3P61077 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2D3P61077 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2D3P61077 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2D3P61077 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
UBE2D3P61077 AL109954.1-202ENST00000564051 2148 ntBASIC11.3□□□□□ -0.6
UBE2D3P61077 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2D3P61077 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2D3P61077 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
UBE2D3P61077 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
UBE2D3P61077 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
UBE2D3P61077 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC11.3□□□□□ -0.6
UBE2D3P61077 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
UBE2D3P61077 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2D3P61077 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2D3P61077 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC11.3□□□□□ -0.6
UBE2D3P61077 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2D3P61077 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
UBE2D3P61077 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2D3P61077 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC11.3□□□□□ -0.6
UBE2D3P61077 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2D3P61077 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
UBE2D3P61077 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2D3P61077 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2D3P61077 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2D3P61077 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2D3P61077 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2D3P61077 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2D3P61077 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2D3P61077 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2D3P61077 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
UBE2D3P61077 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC11.3□□□□□ -0.6
UBE2D3P61077 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC11.3□□□□□ -0.6
UBE2D3P61077 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
UBE2D3P61077 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC11.3□□□□□ -0.6
UBE2D3P61077 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2D3P61077 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2D3P61077 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC11.3□□□□□ -0.6
UBE2D3P61077 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC11.3□□□□□ -0.6
UBE2D3P61077 RNA5SP416-201ENST00000516838 111 ntBASIC11.3□□□□□ -0.6
UBE2D3P61077 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC11.3□□□□□ -0.6
UBE2D3P61077 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC11.3□□□□□ -0.6
UBE2D3P61077 AC105233.2-201ENST00000523697 349 ntBASIC11.3□□□□□ -0.6
UBE2D3P61077 EHF-205ENST00000527935 557 ntTSL 2 BASIC11.3□□□□□ -0.6
UBE2D3P61077 AF228730.5-201ENST00000530288 346 ntBASIC11.3□□□□□ -0.6
UBE2D3P61077 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC11.3□□□□□ -0.6
UBE2D3P61077 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2D3P61077 RPL18-209ENST00000550645 463 ntTSL 5 BASIC11.3□□□□□ -0.6
UBE2D3P61077 RPL18-214ENST00000552588 559 ntTSL 3 BASIC11.3□□□□□ -0.6
UBE2D3P61077 AC024267.1-201ENST00000582320 895 ntBASIC11.3□□□□□ -0.6
UBE2D3P61077 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2D3P61077 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2D3P61077 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC11.3□□□□□ -0.6
UBE2D3P61077 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2D3P61077 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
UBE2D3P61077 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC11.3□□□□□ -0.6
UBE2D3P61077 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2D3P61077 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2D3P61077 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC11.3□□□□□ -0.6
UBE2D3P61077 AC134407.2-201ENST00000625089 1978 ntBASIC11.3□□□□□ -0.6
UBE2D3P61077 IL9RP2-201ENST00000423948 1312 ntBASIC11.3□□□□□ -0.6
UBE2D3P61077 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2D3P61077 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2D3P61077 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
UBE2D3P61077 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC11.3□□□□□ -0.6
UBE2D3P61077 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC11.3□□□□□ -0.6
UBE2D3P61077 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
UBE2D3P61077 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
UBE2D3P61077 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
UBE2D3P61077 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC11.3□□□□□ -0.6
UBE2D3P61077 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC11.3□□□□□ -0.6
UBE2D3P61077 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2D3P61077 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2D3P61077 CICP23-201ENST00000605013 2741 ntBASIC11.29□□□□□ -0.6
UBE2D3P61077 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC11.29□□□□□ -0.6
UBE2D3P61077 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2D3P61077 ZNF259P1-201ENST00000407656 1365 ntBASIC11.29□□□□□ -0.6
UBE2D3P61077 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC11.29□□□□□ -0.6
UBE2D3P61077 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC11.29□□□□□ -0.6
UBE2D3P61077 TMBIM7P-203ENST00000641617 1718 ntBASIC11.29□□□□□ -0.6
UBE2D3P61077 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC11.29□□□□□ -0.6
UBE2D3P61077 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2D3P61077 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC11.29□□□□□ -0.6
UBE2D3P61077 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms