Protein–RNA interactions for Protein: P55769

SNU13, NHP2-like protein 1, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13P55769 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNU13P55769 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.69□□□□□ -0.22
SNU13P55769 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNU13P55769 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNU13P55769 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SNU13P55769 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNU13P55769 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNU13P55769 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.69□□□□□ -0.22
SNU13P55769 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.69□□□□□ -0.22
SNU13P55769 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNU13P55769 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNU13P55769 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNU13P55769 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.69□□□□□ -0.22
SNU13P55769 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SNU13P55769 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNU13P55769 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNU13P55769 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC13.69□□□□□ -0.22
SNU13P55769 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNU13P55769 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNU13P55769 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNU13P55769 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SNU13P55769 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNU13P55769 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC13.69□□□□□ -0.22
SNU13P55769 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC13.69□□□□□ -0.22
SNU13P55769 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC13.69□□□□□ -0.22
SNU13P55769 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SNU13P55769 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
SNU13P55769 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC13.69□□□□□ -0.22
SNU13P55769 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SNU13P55769 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC13.69□□□□□ -0.22
SNU13P55769 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SNU13P55769 POLD2P1-201ENST00000511220 997 ntBASIC13.69□□□□□ -0.22
SNU13P55769 AC002347.1-201ENST00000569543 541 ntBASIC13.69□□□□□ -0.22
SNU13P55769 AL365330.1-201ENST00000607459 531 ntBASIC13.69□□□□□ -0.22
SNU13P55769 FAM197Y3-203ENST00000618346 717 ntBASIC13.69□□□□□ -0.22
SNU13P55769 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNU13P55769 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC13.69□□□□□ -0.22
SNU13P55769 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC13.69□□□□□ -0.22
SNU13P55769 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNU13P55769 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SNU13P55769 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNU13P55769 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNU13P55769 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.69□□□□□ -0.22
SNU13P55769 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SNU13P55769 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNU13P55769 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
SNU13P55769 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNU13P55769 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.69□□□□□ -0.22
SNU13P55769 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNU13P55769 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SNU13P55769 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SNU13P55769 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNU13P55769 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.69□□□□□ -0.22
SNU13P55769 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SNU13P55769 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNU13P55769 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNU13P55769 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNU13P55769 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNU13P55769 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC13.68□□□□□ -0.22
SNU13P55769 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SNU13P55769 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
SNU13P55769 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNU13P55769 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.68□□□□□ -0.22
SNU13P55769 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SNU13P55769 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
SNU13P55769 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNU13P55769 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNU13P55769 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNU13P55769 AC138035.3-201ENST00000622706 2791 ntBASIC13.68□□□□□ -0.22
SNU13P55769 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC13.68□□□□□ -0.22
SNU13P55769 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNU13P55769 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SNU13P55769 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SNU13P55769 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNU13P55769 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNU13P55769 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNU13P55769 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNU13P55769 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.68□□□□□ -0.22
SNU13P55769 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
SNU13P55769 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNU13P55769 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SNU13P55769 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNU13P55769 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNU13P55769 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
SNU13P55769 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNU13P55769 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC13.68□□□□□ -0.22
SNU13P55769 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNU13P55769 TEX30-205ENST00000376029 959 ntTSL 2 BASIC13.68□□□□□ -0.22
SNU13P55769 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SNU13P55769 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
SNU13P55769 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC13.68□□□□□ -0.22
SNU13P55769 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC13.68□□□□□ -0.22
SNU13P55769 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC13.68□□□□□ -0.22
SNU13P55769 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC13.68□□□□□ -0.22
SNU13P55769 AL135744.1-201ENST00000565098 629 ntBASIC13.68□□□□□ -0.22
SNU13P55769 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC13.68□□□□□ -0.22
SNU13P55769 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNU13P55769 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNU13P55769 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNU13P55769 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms