Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
FOXG1P55316 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC13.81□□□□□ -0.2
FOXG1P55316 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
FOXG1P55316 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.81□□□□□ -0.2
FOXG1P55316 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.8□□□□□ -0.2
FOXG1P55316 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FOXG1P55316 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.8□□□□□ -0.2
FOXG1P55316 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FOXG1P55316 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
FOXG1P55316 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
FOXG1P55316 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FOXG1P55316 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
FOXG1P55316 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.8□□□□□ -0.2
FOXG1P55316 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC13.8□□□□□ -0.2
FOXG1P55316 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
FOXG1P55316 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FOXG1P55316 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.8□□□□□ -0.2
FOXG1P55316 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
FOXG1P55316 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.8□□□□□ -0.2
FOXG1P55316 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.8□□□□□ -0.2
FOXG1P55316 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FOXG1P55316 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
FOXG1P55316 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FOXG1P55316 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
FOXG1P55316 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
FOXG1P55316 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC13.8□□□□□ -0.2
FOXG1P55316 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FOXG1P55316 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.8□□□□□ -0.2
FOXG1P55316 DGCR5-201ENST00000399539 862 ntBASIC13.8□□□□□ -0.2
FOXG1P55316 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC13.8□□□□□ -0.2
FOXG1P55316 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.8□□□□□ -0.2
FOXG1P55316 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.8□□□□□ -0.2
FOXG1P55316 GSAP-205ENST00000430584 600 ntTSL 5 BASIC13.8□□□□□ -0.2
FOXG1P55316 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
FOXG1P55316 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.8□□□□□ -0.2
FOXG1P55316 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.8□□□□□ -0.2
FOXG1P55316 TP53TG3HP-202ENST00000569755 579 ntBASIC13.8□□□□□ -0.2
FOXG1P55316 COX11-202ENST00000571584 1108 ntTSL 2 BASIC13.8□□□□□ -0.2
FOXG1P55316 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC13.8□□□□□ -0.2
FOXG1P55316 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC13.8□□□□□ -0.2
FOXG1P55316 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
FOXG1P55316 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC13.8□□□□□ -0.2
FOXG1P55316 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FOXG1P55316 AC025048.6-201ENST00000634326 1161 ntBASIC13.8□□□□□ -0.2
FOXG1P55316 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
FOXG1P55316 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
FOXG1P55316 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC13.8□□□□□ -0.2
FOXG1P55316 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
FOXG1P55316 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC13.8□□□□□ -0.2
FOXG1P55316 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
FOXG1P55316 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
FOXG1P55316 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FOXG1P55316 AC127383.1-201ENST00000444697 1800 ntBASIC13.8□□□□□ -0.2
FOXG1P55316 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
FOXG1P55316 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
FOXG1P55316 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
FOXG1P55316 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FOXG1P55316 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC13.8□□□□□ -0.2
FOXG1P55316 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
FOXG1P55316 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
FOXG1P55316 AL121723.1-201ENST00000445194 1519 ntBASIC13.8□□□□□ -0.2
FOXG1P55316 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FOXG1P55316 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
FOXG1P55316 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FOXG1P55316 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FOXG1P55316 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FOXG1P55316 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FOXG1P55316 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FOXG1P55316 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
FOXG1P55316 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FOXG1P55316 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FOXG1P55316 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
FOXG1P55316 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.79□□□□□ -0.2
FOXG1P55316 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
FOXG1P55316 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC13.79□□□□□ -0.2
FOXG1P55316 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.79□□□□□ -0.2
FOXG1P55316 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC13.79□□□□□ -0.2
FOXG1P55316 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.79□□□□□ -0.2
FOXG1P55316 AC123567.1-201ENST00000548294 1261 ntBASIC13.79□□□□□ -0.2
FOXG1P55316 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
FOXG1P55316 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13.79□□□□□ -0.2
FOXG1P55316 AC140912.1-201ENST00000577171 1054 ntBASIC13.79□□□□□ -0.2
FOXG1P55316 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.79□□□□□ -0.2
FOXG1P55316 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC13.79□□□□□ -0.2
FOXG1P55316 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC13.79□□□□□ -0.2
FOXG1P55316 AC105233.6-201ENST00000642093 218 ntBASIC13.79□□□□□ -0.2
FOXG1P55316 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.79□□□□□ -0.2
FOXG1P55316 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC13.79□□□□□ -0.2
FOXG1P55316 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.79□□□□□ -0.2
FOXG1P55316 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC13.79□□□□□ -0.2
FOXG1P55316 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FOXG1P55316 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.79□□□□□ -0.2
FOXG1P55316 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
FOXG1P55316 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FOXG1P55316 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FOXG1P55316 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FOXG1P55316 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
FOXG1P55316 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FOXG1P55316 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
FOXG1P55316 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms