Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CDH13P55290 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CDH13P55290 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.49■□□□□ 0.07
CDH13P55290 UXT-AS1-201ENST00000590504 1525 ntBASIC15.49■□□□□ 0.07
CDH13P55290 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.49■□□□□ 0.07
CDH13P55290 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.49■□□□□ 0.07
CDH13P55290 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CDH13P55290 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.49■□□□□ 0.07
CDH13P55290 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.49■□□□□ 0.07
CDH13P55290 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.49■□□□□ 0.07
CDH13P55290 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.49■□□□□ 0.07
CDH13P55290 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDH13P55290 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDH13P55290 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDH13P55290 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.49■□□□□ 0.07
CDH13P55290 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.49■□□□□ 0.07
CDH13P55290 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.49■□□□□ 0.07
CDH13P55290 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.49■□□□□ 0.07
CDH13P55290 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CDH13P55290 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.49■□□□□ 0.07
CDH13P55290 AL139010.1-201ENST00000454878 894 ntBASIC15.49■□□□□ 0.07
CDH13P55290 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.49■□□□□ 0.07
CDH13P55290 POLD2P1-201ENST00000511220 997 ntBASIC15.49■□□□□ 0.07
CDH13P55290 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.49■□□□□ 0.07
CDH13P55290 SLC25A39P2-201ENST00000537614 270 ntBASIC15.49■□□□□ 0.07
CDH13P55290 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDH13P55290 AL450472.2-201ENST00000603663 1156 ntBASIC15.49■□□□□ 0.07
CDH13P55290 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDH13P55290 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDH13P55290 KRT8P37-201ENST00000451609 1420 ntBASIC15.49■□□□□ 0.07
CDH13P55290 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDH13P55290 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDH13P55290 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.49■□□□□ 0.07
CDH13P55290 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDH13P55290 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDH13P55290 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.48■□□□□ 0.07
CDH13P55290 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDH13P55290 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CDH13P55290 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CDH13P55290 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDH13P55290 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDH13P55290 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
CDH13P55290 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.48■□□□□ 0.07
CDH13P55290 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.48■□□□□ 0.07
CDH13P55290 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CDH13P55290 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
CDH13P55290 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.48■□□□□ 0.07
CDH13P55290 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDH13P55290 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDH13P55290 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
CDH13P55290 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDH13P55290 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.48■□□□□ 0.07
CDH13P55290 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.48■□□□□ 0.07
CDH13P55290 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.48■□□□□ 0.07
CDH13P55290 PHKG1P2-201ENST00000457537 863 ntBASIC15.48■□□□□ 0.07
CDH13P55290 AC069335.1-201ENST00000489972 472 ntBASIC15.48■□□□□ 0.07
CDH13P55290 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.48■□□□□ 0.07
CDH13P55290 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.48■□□□□ 0.07
CDH13P55290 PGAM5P1-201ENST00000518923 814 ntBASIC15.48■□□□□ 0.07
CDH13P55290 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.48■□□□□ 0.07
CDH13P55290 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
CDH13P55290 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.48■□□□□ 0.07
CDH13P55290 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.48■□□□□ 0.07
CDH13P55290 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.48■□□□□ 0.07
CDH13P55290 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CDH13P55290 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
CDH13P55290 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDH13P55290 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDH13P55290 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.48■□□□□ 0.07
CDH13P55290 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CDH13P55290 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDH13P55290 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
CDH13P55290 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDH13P55290 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CDH13P55290 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDH13P55290 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDH13P55290 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
CDH13P55290 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.48■□□□□ 0.07
CDH13P55290 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.48■□□□□ 0.07
CDH13P55290 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDH13P55290 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CDH13P55290 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CDH13P55290 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.48■□□□□ 0.07
CDH13P55290 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CDH13P55290 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDH13P55290 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDH13P55290 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDH13P55290 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDH13P55290 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CDH13P55290 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CDH13P55290 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDH13P55290 AC099063.4-201ENST00000641099 1602 ntBASIC15.47■□□□□ 0.07
CDH13P55290 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CDH13P55290 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDH13P55290 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
CDH13P55290 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDH13P55290 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
CDH13P55290 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
CDH13P55290 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDH13P55290 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms