Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
CDH11P55287 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH11P55287 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH11P55287 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH11P55287 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH11P55287 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CDH11P55287 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDH11P55287 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH11P55287 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH11P55287 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH11P55287 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.54□□□□□ -0.08
CDH11P55287 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH11P55287 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDH11P55287 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.54□□□□□ -0.08
CDH11P55287 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH11P55287 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH11P55287 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CDH11P55287 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CDH11P55287 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH11P55287 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH11P55287 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH11P55287 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH11P55287 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH11P55287 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH11P55287 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH11P55287 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
CDH11P55287 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CDH11P55287 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.54□□□□□ -0.08
CDH11P55287 AC004461.1-201ENST00000412461 403 ntBASIC14.54□□□□□ -0.08
CDH11P55287 PMS2P4-201ENST00000412466 1052 ntBASIC14.54□□□□□ -0.08
CDH11P55287 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDH11P55287 AC093724.1-201ENST00000448659 1027 ntBASIC14.54□□□□□ -0.08
CDH11P55287 SPDYE11-202ENST00000450699 704 ntBASIC14.54□□□□□ -0.08
CDH11P55287 RN7SL589P-201ENST00000481268 310 ntBASIC14.54□□□□□ -0.08
CDH11P55287 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.54□□□□□ -0.08
CDH11P55287 FAM86C2P-203ENST00000528684 1004 ntBASIC14.54□□□□□ -0.08
CDH11P55287 SPDYE9P-201ENST00000570642 692 ntBASIC14.54□□□□□ -0.08
CDH11P55287 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.54□□□□□ -0.08
CDH11P55287 AC022145.2-201ENST00000598203 171 ntBASIC14.54□□□□□ -0.08
CDH11P55287 SPDYE10P-202ENST00000612005 668 ntBASIC14.54□□□□□ -0.08
CDH11P55287 SPDYE8P-202ENST00000612377 668 ntBASIC14.54□□□□□ -0.08
CDH11P55287 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDH11P55287 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.54□□□□□ -0.08
CDH11P55287 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH11P55287 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDH11P55287 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH11P55287 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.54□□□□□ -0.08
CDH11P55287 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDH11P55287 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.54□□□□□ -0.08
CDH11P55287 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH11P55287 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH11P55287 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH11P55287 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH11P55287 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.54□□□□□ -0.08
CDH11P55287 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDH11P55287 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDH11P55287 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH11P55287 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH11P55287 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDH11P55287 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDH11P55287 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH11P55287 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH11P55287 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDH11P55287 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH11P55287 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH11P55287 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.53□□□□□ -0.08
CDH11P55287 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH11P55287 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH11P55287 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.53□□□□□ -0.08
CDH11P55287 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH11P55287 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.53□□□□□ -0.08
CDH11P55287 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH11P55287 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.53□□□□□ -0.08
CDH11P55287 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDH11P55287 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDH11P55287 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDH11P55287 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CDH11P55287 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.53□□□□□ -0.08
CDH11P55287 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDH11P55287 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH11P55287 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH11P55287 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH11P55287 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CDH11P55287 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.53□□□□□ -0.08
CDH11P55287 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.53□□□□□ -0.08
CDH11P55287 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDH11P55287 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDH11P55287 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDH11P55287 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.53□□□□□ -0.08
CDH11P55287 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH11P55287 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH11P55287 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.53□□□□□ -0.08
CDH11P55287 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.53□□□□□ -0.08
CDH11P55287 HMGA1P7-201ENST00000406908 502 ntBASIC14.53□□□□□ -0.08
CDH11P55287 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.53□□□□□ -0.08
CDH11P55287 AL671277.1-201ENST00000429656 993 ntBASIC14.53□□□□□ -0.08
CDH11P55287 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.53□□□□□ -0.08
CDH11P55287 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.53□□□□□ -0.08
CDH11P55287 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.53□□□□□ -0.08
CDH11P55287 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms