Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.22■□□□□ 0.19
ATXN3P54252 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.22■□□□□ 0.19
ATXN3P54252 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ATXN3P54252 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATXN3P54252 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATXN3P54252 SPDYE19P-201ENST00000338590 713 ntBASIC16.22■□□□□ 0.19
ATXN3P54252 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.22■□□□□ 0.19
ATXN3P54252 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
ATXN3P54252 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
ATXN3P54252 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ATXN3P54252 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC16.22■□□□□ 0.19
ATXN3P54252 DOC2GP-202ENST00000514950 1163 ntBASIC16.22■□□□□ 0.19
ATXN3P54252 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.22■□□□□ 0.19
ATXN3P54252 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.22■□□□□ 0.19
ATXN3P54252 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.22■□□□□ 0.19
ATXN3P54252 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
ATXN3P54252 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
ATXN3P54252 AC004840.1-201ENST00000636359 365 ntBASIC16.22■□□□□ 0.19
ATXN3P54252 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATXN3P54252 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATXN3P54252 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ATXN3P54252 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATXN3P54252 LINC00895-201ENST00000629028 1637 ntBASIC16.22■□□□□ 0.19
ATXN3P54252 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATXN3P54252 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATXN3P54252 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ATXN3P54252 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATXN3P54252 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
ATXN3P54252 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ATXN3P54252 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.22■□□□□ 0.19
ATXN3P54252 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.22■□□□□ 0.19
ATXN3P54252 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
ATXN3P54252 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.21■□□□□ 0.19
ATXN3P54252 AC010491.1-201ENST00000563101 2797 ntBASIC16.21■□□□□ 0.19
ATXN3P54252 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATXN3P54252 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
ATXN3P54252 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATXN3P54252 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATXN3P54252 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATXN3P54252 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ATXN3P54252 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATXN3P54252 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATXN3P54252 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATXN3P54252 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATXN3P54252 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
ATXN3P54252 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATXN3P54252 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
ATXN3P54252 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATXN3P54252 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
ATXN3P54252 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.21■□□□□ 0.19
ATXN3P54252 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
ATXN3P54252 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
ATXN3P54252 MIR658-201ENST00000385210 100 ntBASIC16.21■□□□□ 0.19
ATXN3P54252 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.21■□□□□ 0.19
ATXN3P54252 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATXN3P54252 MIR1909-201ENST00000411312 80 ntBASIC16.21■□□□□ 0.19
ATXN3P54252 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.21■□□□□ 0.19
ATXN3P54252 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.21■□□□□ 0.19
ATXN3P54252 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.21■□□□□ 0.19
ATXN3P54252 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.21■□□□□ 0.19
ATXN3P54252 ACA64.2-201ENST00000459014 129 ntBASIC16.21■□□□□ 0.19
ATXN3P54252 AC098859.1-201ENST00000502915 1238 ntBASIC16.21■□□□□ 0.19
ATXN3P54252 KRT17P8-201ENST00000540749 863 ntBASIC16.21■□□□□ 0.19
ATXN3P54252 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC16.21■□□□□ 0.19
ATXN3P54252 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.21■□□□□ 0.19
ATXN3P54252 AC132938.2-201ENST00000579188 680 ntBASIC16.21■□□□□ 0.19
ATXN3P54252 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.21■□□□□ 0.19
ATXN3P54252 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ATXN3P54252 AC008494.3-201ENST00000606615 944 ntBASIC16.21■□□□□ 0.19
ATXN3P54252 AL591163.1-201ENST00000641757 987 ntBASIC16.21■□□□□ 0.19
ATXN3P54252 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATXN3P54252 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATXN3P54252 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATXN3P54252 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATXN3P54252 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
ATXN3P54252 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATXN3P54252 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.21■□□□□ 0.19
ATXN3P54252 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ATXN3P54252 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATXN3P54252 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
ATXN3P54252 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
ATXN3P54252 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.21■□□□□ 0.18
ATXN3P54252 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.2■□□□□ 0.18
ATXN3P54252 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATXN3P54252 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATXN3P54252 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.2■□□□□ 0.18
ATXN3P54252 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ATXN3P54252 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.2■□□□□ 0.18
ATXN3P54252 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
ATXN3P54252 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.2■□□□□ 0.18
ATXN3P54252 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
ATXN3P54252 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
ATXN3P54252 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC16.2■□□□□ 0.18
ATXN3P54252 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.2■□□□□ 0.18
ATXN3P54252 AL079307.3-201ENST00000556114 283 ntBASIC16.2■□□□□ 0.18
ATXN3P54252 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.2■□□□□ 0.18
ATXN3P54252 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC16.2■□□□□ 0.18
ATXN3P54252 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.2■□□□□ 0.18
ATXN3P54252 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ATXN3P54252 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms