Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AC138028.6-201ENST00000616106 1482 ntBASIC19.25■□□□□ 0.67
NUP98P52948 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC19.25■□□□□ 0.67
NUP98P52948 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
NUP98P52948 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC19.24■□□□□ 0.67
NUP98P52948 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NUP98P52948 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NUP98P52948 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NUP98P52948 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NUP98P52948 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NUP98P52948 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NUP98P52948 CLUHP2-201ENST00000426660 1303 ntBASIC19.24■□□□□ 0.67
NUP98P52948 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
NUP98P52948 AC100850.1-201ENST00000506768 649 ntBASIC19.24■□□□□ 0.67
NUP98P52948 RNF41-210ENST00000552244 716 ntTSL 3 BASIC19.24■□□□□ 0.67
NUP98P52948 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
NUP98P52948 INO80C-210ENST00000590757 595 ntTSL 2 BASIC19.24■□□□□ 0.67
NUP98P52948 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC19.24■□□□□ 0.67
NUP98P52948 AL603764.1-201ENST00000636452 321 ntBASIC19.24■□□□□ 0.67
NUP98P52948 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NUP98P52948 AC092127.1-201ENST00000567093 3455 ntBASIC19.24■□□□□ 0.67
NUP98P52948 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NUP98P52948 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NUP98P52948 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
NUP98P52948 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
NUP98P52948 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
NUP98P52948 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NUP98P52948 REXO1L4P-201ENST00000605109 1937 ntBASIC19.24■□□□□ 0.67
NUP98P52948 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
NUP98P52948 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NUP98P52948 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC19.23■□□□□ 0.67
NUP98P52948 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NUP98P52948 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NUP98P52948 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NUP98P52948 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NUP98P52948 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NUP98P52948 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
NUP98P52948 CD8B2-202ENST00000417670 633 ntBASIC19.23■□□□□ 0.67
NUP98P52948 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC19.23■□□□□ 0.67
NUP98P52948 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
NUP98P52948 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC19.23■□□□□ 0.67
NUP98P52948 AL451050.2-201ENST00000606967 682 ntBASIC19.23■□□□□ 0.67
NUP98P52948 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NUP98P52948 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NUP98P52948 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
NUP98P52948 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NUP98P52948 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NUP98P52948 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NUP98P52948 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NUP98P52948 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
NUP98P52948 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
NUP98P52948 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC19.23■□□□□ 0.67
NUP98P52948 POM121L10P-201ENST00000436994 1285 ntBASIC19.23■□□□□ 0.67
NUP98P52948 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC19.23■□□□□ 0.67
NUP98P52948 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC19.23■□□□□ 0.67
NUP98P52948 AC013355.1-201ENST00000562625 723 ntBASIC19.23■□□□□ 0.67
NUP98P52948 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC19.23■□□□□ 0.67
NUP98P52948 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
NUP98P52948 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
NUP98P52948 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
NUP98P52948 AC055811.4-201ENST00000624039 1754 ntBASIC19.23■□□□□ 0.67
NUP98P52948 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NUP98P52948 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NUP98P52948 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NUP98P52948 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
NUP98P52948 AC015818.8-201ENST00000587907 1519 ntBASIC19.22■□□□□ 0.67
NUP98P52948 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NUP98P52948 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NUP98P52948 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
NUP98P52948 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC19.22■□□□□ 0.67
NUP98P52948 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NUP98P52948 AL136309.1-201ENST00000403917 691 ntBASIC19.22■□□□□ 0.67
NUP98P52948 RN7SKP175-201ENST00000408472 289 ntBASIC19.22■□□□□ 0.67
NUP98P52948 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC19.22■□□□□ 0.67
NUP98P52948 CHMP4BP1-201ENST00000556017 588 ntBASIC19.22■□□□□ 0.67
NUP98P52948 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC19.22■□□□□ 0.67
NUP98P52948 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NUP98P52948 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NUP98P52948 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC19.22■□□□□ 0.67
NUP98P52948 PCDHB19P-201ENST00000570871 2371 ntBASIC19.22■□□□□ 0.67
NUP98P52948 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NUP98P52948 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NUP98P52948 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NUP98P52948 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NUP98P52948 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NUP98P52948 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
NUP98P52948 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
NUP98P52948 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NUP98P52948 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
NUP98P52948 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NUP98P52948 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
NUP98P52948 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NUP98P52948 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC19.21■□□□□ 0.67
NUP98P52948 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NUP98P52948 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
NUP98P52948 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
NUP98P52948 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NUP98P52948 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
NUP98P52948 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NUP98P52948 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NUP98P52948 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms