Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
CCR9P51686 NARF-206ENST00000457415 1668 ntTSL 5 BASIC13.97□□□□□ -0.17
CCR9P51686 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.97□□□□□ -0.17
CCR9P51686 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.97□□□□□ -0.17
CCR9P51686 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
CCR9P51686 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCR9P51686 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CCR9P51686 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCR9P51686 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCR9P51686 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CCR9P51686 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.97□□□□□ -0.17
CCR9P51686 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
CCR9P51686 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CCR9P51686 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CCR9P51686 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCR9P51686 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCR9P51686 KRT8P44-201ENST00000441609 1350 ntBASIC13.96□□□□□ -0.17
CCR9P51686 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC13.96□□□□□ -0.17
CCR9P51686 OR2I1P-209ENST00000641730 5365 ntBASIC13.96□□□□□ -0.17
CCR9P51686 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
CCR9P51686 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCR9P51686 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCR9P51686 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCR9P51686 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CCR9P51686 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CCR9P51686 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCR9P51686 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.96□□□□□ -0.17
CCR9P51686 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CCR9P51686 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.96□□□□□ -0.17
CCR9P51686 REM2-202ENST00000536884 1331 ntTSL 2 BASIC13.96□□□□□ -0.17
CCR9P51686 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CCR9P51686 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CCR9P51686 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCR9P51686 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.96□□□□□ -0.17
CCR9P51686 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCR9P51686 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCR9P51686 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CCR9P51686 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CCR9P51686 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCR9P51686 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCR9P51686 AC002056.1-201ENST00000395613 760 ntBASIC13.96□□□□□ -0.17
CCR9P51686 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CCR9P51686 AL645939.2-201ENST00000427340 991 ntBASIC13.96□□□□□ -0.17
CCR9P51686 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC13.96□□□□□ -0.17
CCR9P51686 RNA5SP419-201ENST00000515908 135 ntBASIC13.96□□□□□ -0.17
CCR9P51686 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCR9P51686 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.96□□□□□ -0.17
CCR9P51686 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC13.96□□□□□ -0.17
CCR9P51686 AP001005.1-201ENST00000571755 1248 ntBASIC13.96□□□□□ -0.17
CCR9P51686 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CCR9P51686 RN7SL510P-201ENST00000581311 263 ntBASIC13.96□□□□□ -0.17
CCR9P51686 AC068137.2-201ENST00000605408 478 ntBASIC13.96□□□□□ -0.17
CCR9P51686 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC13.96□□□□□ -0.17
CCR9P51686 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.96□□□□□ -0.17
CCR9P51686 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC13.96□□□□□ -0.17
CCR9P51686 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC13.96□□□□□ -0.17
CCR9P51686 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC13.96□□□□□ -0.17
CCR9P51686 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CCR9P51686 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
CCR9P51686 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC13.96□□□□□ -0.17
CCR9P51686 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CCR9P51686 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CCR9P51686 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC13.96□□□□□ -0.18
CCR9P51686 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
CCR9P51686 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.96□□□□□ -0.18
CCR9P51686 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
CCR9P51686 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
CCR9P51686 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CCR9P51686 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.96□□□□□ -0.18
CCR9P51686 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
CCR9P51686 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.18
CCR9P51686 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.95□□□□□ -0.18
CCR9P51686 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCR9P51686 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCR9P51686 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCR9P51686 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.95□□□□□ -0.18
CCR9P51686 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CCR9P51686 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCR9P51686 AC127383.1-201ENST00000444697 1800 ntBASIC13.95□□□□□ -0.18
CCR9P51686 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.95□□□□□ -0.18
CCR9P51686 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CCR9P51686 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
CCR9P51686 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCR9P51686 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCR9P51686 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCR9P51686 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CCR9P51686 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13.95□□□□□ -0.18
CCR9P51686 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC13.95□□□□□ -0.18
CCR9P51686 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCR9P51686 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.95□□□□□ -0.18
CCR9P51686 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.95□□□□□ -0.18
CCR9P51686 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.95□□□□□ -0.18
CCR9P51686 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCR9P51686 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCR9P51686 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.95□□□□□ -0.18
CCR9P51686 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.95□□□□□ -0.18
CCR9P51686 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.95□□□□□ -0.18
CCR9P51686 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCR9P51686 AC232323.1-201ENST00000540724 2099 ntBASIC13.95□□□□□ -0.18
CCR9P51686 REXO1L5P-201ENST00000622260 2098 ntBASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms