Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDK7P50613 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.36■□□□□ 0.37
CDK7P50613 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDK7P50613 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDK7P50613 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDK7P50613 SLC25A24P2-201ENST00000415059 510 ntBASIC17.36■□□□□ 0.37
CDK7P50613 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC17.36■□□□□ 0.37
CDK7P50613 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDK7P50613 OARD1-212ENST00000482515 832 ntTSL 2 BASIC17.36■□□□□ 0.37
CDK7P50613 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDK7P50613 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDK7P50613 AC078819.1-201ENST00000547454 765 ntBASIC17.36■□□□□ 0.37
CDK7P50613 AC012085.1-201ENST00000548270 765 ntBASIC17.36■□□□□ 0.37
CDK7P50613 AC132938.4-201ENST00000623835 848 ntBASIC17.36■□□□□ 0.37
CDK7P50613 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDK7P50613 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.36■□□□□ 0.37
CDK7P50613 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
CDK7P50613 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.36■□□□□ 0.37
CDK7P50613 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDK7P50613 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDK7P50613 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDK7P50613 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDK7P50613 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDK7P50613 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDK7P50613 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDK7P50613 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC17.36■□□□□ 0.37
CDK7P50613 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDK7P50613 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC17.36■□□□□ 0.37
CDK7P50613 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CDK7P50613 RNF216P1-203ENST00000404404 2427 ntBASIC17.36■□□□□ 0.37
CDK7P50613 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDK7P50613 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDK7P50613 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.35■□□□□ 0.37
CDK7P50613 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
CDK7P50613 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CDK7P50613 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDK7P50613 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.35■□□□□ 0.37
CDK7P50613 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDK7P50613 FLJ38576-201ENST00000623820 2459 ntBASIC17.35■□□□□ 0.37
CDK7P50613 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDK7P50613 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC17.35■□□□□ 0.37
CDK7P50613 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC17.35■□□□□ 0.37
CDK7P50613 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDK7P50613 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC17.35■□□□□ 0.37
CDK7P50613 PGGT1BP2-201ENST00000398621 1028 ntBASIC17.35■□□□□ 0.37
CDK7P50613 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC17.35■□□□□ 0.37
CDK7P50613 FAM197Y7-201ENST00000432892 766 ntBASIC17.35■□□□□ 0.37
CDK7P50613 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC17.35■□□□□ 0.37
CDK7P50613 Z93015.1-201ENST00000451718 390 ntBASIC17.35■□□□□ 0.37
CDK7P50613 AKR7A2P1-201ENST00000460134 915 ntBASIC17.35■□□□□ 0.37
CDK7P50613 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC17.35■□□□□ 0.37
CDK7P50613 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.35■□□□□ 0.37
CDK7P50613 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDK7P50613 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC17.35■□□□□ 0.37
CDK7P50613 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDK7P50613 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC17.35■□□□□ 0.37
CDK7P50613 AL008638.5-201ENST00000623814 1298 ntBASIC17.35■□□□□ 0.37
CDK7P50613 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDK7P50613 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDK7P50613 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.35■□□□□ 0.37
CDK7P50613 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CDK7P50613 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDK7P50613 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC17.35■□□□□ 0.37
CDK7P50613 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.35■□□□□ 0.37
CDK7P50613 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CDK7P50613 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDK7P50613 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDK7P50613 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.35■□□□□ 0.37
CDK7P50613 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDK7P50613 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDK7P50613 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.35■□□□□ 0.37
CDK7P50613 AC134407.2-201ENST00000625089 1978 ntBASIC17.35■□□□□ 0.37
CDK7P50613 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDK7P50613 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDK7P50613 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.35■□□□□ 0.37
CDK7P50613 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.35■□□□□ 0.37
CDK7P50613 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CDK7P50613 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
CDK7P50613 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDK7P50613 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDK7P50613 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDK7P50613 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDK7P50613 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CDK7P50613 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDK7P50613 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CDK7P50613 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDK7P50613 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDK7P50613 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDK7P50613 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDK7P50613 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDK7P50613 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDK7P50613 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.34■□□□□ 0.37
CDK7P50613 BTBD6P1-201ENST00000412176 1267 ntBASIC17.34■□□□□ 0.37
CDK7P50613 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDK7P50613 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
CDK7P50613 ARTN-209ENST00000479128 471 ntTSL 3 BASIC17.34■□□□□ 0.37
CDK7P50613 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CDK7P50613 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CDK7P50613 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDK7P50613 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms