Protein–RNA interactions for Protein: P49354

FNTA, Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNTAP49354 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FNTAP49354 AC013726.1-201ENST00000563747 2285 ntBASIC16.45■□□□□ 0.22
FNTAP49354 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FNTAP49354 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
FNTAP49354 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
FNTAP49354 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.45■□□□□ 0.22
FNTAP49354 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.45■□□□□ 0.22
FNTAP49354 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
FNTAP49354 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.45■□□□□ 0.22
FNTAP49354 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FNTAP49354 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
FNTAP49354 AL390755.1-201ENST00000623716 2027 ntBASIC16.45■□□□□ 0.22
FNTAP49354 AC067930.6-201ENST00000623257 4947 ntBASIC16.45■□□□□ 0.22
FNTAP49354 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.45■□□□□ 0.22
FNTAP49354 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FNTAP49354 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.45■□□□□ 0.22
FNTAP49354 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
FNTAP49354 AC026396.1-201ENST00000419388 421 ntBASIC16.45■□□□□ 0.22
FNTAP49354 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.45■□□□□ 0.22
FNTAP49354 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.45■□□□□ 0.22
FNTAP49354 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.45■□□□□ 0.22
FNTAP49354 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.45■□□□□ 0.22
FNTAP49354 RARRES2P8-201ENST00000566335 367 ntBASIC16.45■□□□□ 0.22
FNTAP49354 AC018845.2-201ENST00000568326 409 ntBASIC16.45■□□□□ 0.22
FNTAP49354 AP002472.1-201ENST00000577490 586 ntBASIC16.45■□□□□ 0.22
FNTAP49354 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
FNTAP49354 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
FNTAP49354 AC099522.2-201ENST00000607001 744 ntBASIC16.45■□□□□ 0.22
FNTAP49354 AC064836.3-201ENST00000607928 673 ntBASIC16.45■□□□□ 0.22
FNTAP49354 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.45■□□□□ 0.22
FNTAP49354 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.45■□□□□ 0.22
FNTAP49354 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.45■□□□□ 0.22
FNTAP49354 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
FNTAP49354 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FNTAP49354 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
FNTAP49354 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
FNTAP49354 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.45■□□□□ 0.22
FNTAP49354 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FNTAP49354 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.45■□□□□ 0.22
FNTAP49354 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
FNTAP49354 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.45■□□□□ 0.22
FNTAP49354 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FNTAP49354 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FNTAP49354 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
FNTAP49354 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FNTAP49354 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.44■□□□□ 0.22
FNTAP49354 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.44■□□□□ 0.22
FNTAP49354 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FNTAP49354 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
FNTAP49354 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FNTAP49354 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.44■□□□□ 0.22
FNTAP49354 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FNTAP49354 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
FNTAP49354 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FNTAP49354 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.44■□□□□ 0.22
FNTAP49354 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FNTAP49354 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FNTAP49354 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.44■□□□□ 0.22
FNTAP49354 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.44■□□□□ 0.22
FNTAP49354 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.44■□□□□ 0.22
FNTAP49354 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.44■□□□□ 0.22
FNTAP49354 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.44■□□□□ 0.22
FNTAP49354 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.44■□□□□ 0.22
FNTAP49354 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.44■□□□□ 0.22
FNTAP49354 AL450472.2-201ENST00000603663 1156 ntBASIC16.44■□□□□ 0.22
FNTAP49354 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FNTAP49354 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
FNTAP49354 UCKL1-AS1-201ENST00000623569 3602 ntBASIC16.44■□□□□ 0.22
FNTAP49354 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
FNTAP49354 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
FNTAP49354 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
FNTAP49354 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
FNTAP49354 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.44■□□□□ 0.22
FNTAP49354 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FNTAP49354 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
FNTAP49354 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.44■□□□□ 0.22
FNTAP49354 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.44■□□□□ 0.22
FNTAP49354 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.44■□□□□ 0.22
FNTAP49354 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FNTAP49354 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.44■□□□□ 0.22
FNTAP49354 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FNTAP49354 AC148477.4-201ENST00000613430 1793 ntBASIC16.43■□□□□ 0.22
FNTAP49354 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.43■□□□□ 0.22
FNTAP49354 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FNTAP49354 PPP1R26P4-201ENST00000619065 3527 ntBASIC16.43■□□□□ 0.22
FNTAP49354 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC16.43■□□□□ 0.22
FNTAP49354 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.43■□□□□ 0.22
FNTAP49354 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
FNTAP49354 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FNTAP49354 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FNTAP49354 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FNTAP49354 MRPL3P1-201ENST00000400109 1033 ntBASIC16.43■□□□□ 0.22
FNTAP49354 EEF1DP4-201ENST00000446006 880 ntBASIC16.43■□□□□ 0.22
FNTAP49354 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.43■□□□□ 0.22
FNTAP49354 AC074386.1-202ENST00000463561 864 ntBASIC16.43■□□□□ 0.22
FNTAP49354 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.43■□□□□ 0.22
FNTAP49354 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.43■□□□□ 0.22
FNTAP49354 AC112191.1-201ENST00000523689 701 ntBASIC16.43■□□□□ 0.22
FNTAP49354 PDPK2P-202ENST00000562415 1191 ntBASIC16.43■□□□□ 0.22
FNTAP49354 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms