Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC19.61■□□□□ 0.73
RFC4P35249 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC19.61■□□□□ 0.73
RFC4P35249 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC19.61■□□□□ 0.73
RFC4P35249 MIR4706-201ENST00000582134 82 ntBASIC19.61■□□□□ 0.73
RFC4P35249 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC19.61■□□□□ 0.73
RFC4P35249 AC097724.1-201ENST00000609581 426 ntBASIC19.61■□□□□ 0.73
RFC4P35249 AC007663.3-201ENST00000609632 465 ntBASIC19.61■□□□□ 0.73
RFC4P35249 AC244157.2-201ENST00000616239 1006 ntBASIC19.61■□□□□ 0.73
RFC4P35249 AC148477.4-201ENST00000613430 1793 ntBASIC19.61■□□□□ 0.73
RFC4P35249 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RFC4P35249 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RFC4P35249 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RFC4P35249 AMT-233ENST00000636522 1620 ntTSL 2 BASIC19.61■□□□□ 0.73
RFC4P35249 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
RFC4P35249 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RFC4P35249 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RFC4P35249 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RFC4P35249 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
RFC4P35249 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
RFC4P35249 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFC4P35249 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
RFC4P35249 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.6■□□□□ 0.73
RFC4P35249 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.6■□□□□ 0.73
RFC4P35249 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
RFC4P35249 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFC4P35249 MIR769-201ENST00000390225 118 ntBASIC19.6■□□□□ 0.73
RFC4P35249 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
RFC4P35249 TISP43-201ENST00000409793 538 ntTSL 4 BASIC19.6■□□□□ 0.73
RFC4P35249 AC016700.1-201ENST00000429424 312 ntBASIC19.6■□□□□ 0.73
RFC4P35249 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC19.6■□□□□ 0.73
RFC4P35249 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
RFC4P35249 COX5BP1-201ENST00000507622 393 ntBASIC19.6■□□□□ 0.73
RFC4P35249 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC19.6■□□□□ 0.73
RFC4P35249 AC138649.2-201ENST00000615886 705 ntBASIC19.6■□□□□ 0.73
RFC4P35249 GPR39-203ENST00000622084 900 ntTSL 5 BASIC19.6■□□□□ 0.73
RFC4P35249 CU633904.3-201ENST00000624042 1029 ntBASIC19.6■□□□□ 0.73
RFC4P35249 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFC4P35249 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFC4P35249 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC19.6■□□□□ 0.73
RFC4P35249 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
RFC4P35249 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
RFC4P35249 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
RFC4P35249 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFC4P35249 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
RFC4P35249 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFC4P35249 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
RFC4P35249 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFC4P35249 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RFC4P35249 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFC4P35249 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFC4P35249 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
RFC4P35249 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RFC4P35249 AC092171.3-201ENST00000610122 2651 ntBASIC19.59■□□□□ 0.73
RFC4P35249 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
RFC4P35249 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RFC4P35249 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
RFC4P35249 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RFC4P35249 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RFC4P35249 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
RFC4P35249 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RFC4P35249 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RFC4P35249 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
RFC4P35249 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RFC4P35249 SNX21-203ENST00000372541 771 ntTSL 2 BASIC19.59■□□□□ 0.73
RFC4P35249 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC19.59■□□□□ 0.73
RFC4P35249 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC19.59■□□□□ 0.73
RFC4P35249 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC19.59■□□□□ 0.73
RFC4P35249 NKAIN1P1-201ENST00000435754 582 ntBASIC19.59■□□□□ 0.73
RFC4P35249 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RFC4P35249 AC245884.6-201ENST00000515672 1067 ntBASIC19.59■□□□□ 0.73
RFC4P35249 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RFC4P35249 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC19.59■□□□□ 0.73
RFC4P35249 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC19.59■□□□□ 0.73
RFC4P35249 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
RFC4P35249 AC091812.3-201ENST00000621362 345 ntBASIC19.59■□□□□ 0.73
RFC4P35249 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RFC4P35249 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC19.59■□□□□ 0.73
RFC4P35249 LRRC59-203ENST00000576448 1531 ntBASIC19.59■□□□□ 0.73
RFC4P35249 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
RFC4P35249 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RFC4P35249 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RFC4P35249 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RFC4P35249 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC19.59■□□□□ 0.73
RFC4P35249 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RFC4P35249 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
RFC4P35249 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
RFC4P35249 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RFC4P35249 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RFC4P35249 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RFC4P35249 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RFC4P35249 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RFC4P35249 NDUFAB1P1-201ENST00000404262 460 ntBASIC19.58■□□□□ 0.72
RFC4P35249 AL133466.1-201ENST00000447582 150 ntBASIC19.58■□□□□ 0.72
RFC4P35249 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC19.58■□□□□ 0.72
RFC4P35249 AC044849.1-201ENST00000519737 1188 ntBASIC19.58■□□□□ 0.72
RFC4P35249 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC19.58■□□□□ 0.72
RFC4P35249 RNF41-210ENST00000552244 716 ntTSL 3 BASIC19.58■□□□□ 0.72
RFC4P35249 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC19.58■□□□□ 0.72
RFC4P35249 NAT9-224ENST00000583757 583 ntTSL 3 BASIC19.58■□□□□ 0.72
RFC4P35249 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms