Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
CKS2P33552 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
CKS2P33552 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
CKS2P33552 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CKS2P33552 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CKS2P33552 ABR-228ENST00000574437 3196 ntTSL 5 BASIC11.69□□□□□ -0.54
CKS2P33552 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
CKS2P33552 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CKS2P33552 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CKS2P33552 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC11.68□□□□□ -0.54
CKS2P33552 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CKS2P33552 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
CKS2P33552 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CKS2P33552 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CKS2P33552 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC11.68□□□□□ -0.54
CKS2P33552 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
CKS2P33552 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CKS2P33552 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CKS2P33552 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CKS2P33552 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CKS2P33552 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CKS2P33552 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
CKS2P33552 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CKS2P33552 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CKS2P33552 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
CKS2P33552 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
CKS2P33552 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CKS2P33552 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
CKS2P33552 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CKS2P33552 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
CKS2P33552 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CKS2P33552 BX005266.1-201ENST00000473402 457 ntBASIC11.68□□□□□ -0.54
CKS2P33552 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC11.68□□□□□ -0.54
CKS2P33552 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC11.68□□□□□ -0.54
CKS2P33552 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC11.68□□□□□ -0.54
CKS2P33552 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
CKS2P33552 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC11.68□□□□□ -0.54
CKS2P33552 LINC01023-201ENST00000606054 436 ntBASIC11.68□□□□□ -0.54
CKS2P33552 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC11.68□□□□□ -0.54
CKS2P33552 AL121672.3-201ENST00000608644 468 ntBASIC11.68□□□□□ -0.54
CKS2P33552 NSUN5P1-202ENST00000421140 1535 ntBASIC11.68□□□□□ -0.54
CKS2P33552 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC11.68□□□□□ -0.54
CKS2P33552 NSUN5P2-203ENST00000457352 1529 ntBASIC11.68□□□□□ -0.54
CKS2P33552 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CKS2P33552 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC11.68□□□□□ -0.54
CKS2P33552 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
CKS2P33552 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC11.68□□□□□ -0.54
CKS2P33552 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CKS2P33552 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CKS2P33552 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
CKS2P33552 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC11.68□□□□□ -0.54
CKS2P33552 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CKS2P33552 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC11.68□□□□□ -0.54
CKS2P33552 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC11.68□□□□□ -0.54
CKS2P33552 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
CKS2P33552 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CKS2P33552 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
CKS2P33552 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
CKS2P33552 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
CKS2P33552 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CKS2P33552 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CKS2P33552 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CKS2P33552 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
CKS2P33552 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CKS2P33552 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CKS2P33552 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CKS2P33552 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CKS2P33552 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC11.68□□□□□ -0.54
CKS2P33552 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
CKS2P33552 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
CKS2P33552 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
CKS2P33552 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CKS2P33552 KRT8P44-201ENST00000441609 1350 ntBASIC11.67□□□□□ -0.54
CKS2P33552 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC11.67□□□□□ -0.54
CKS2P33552 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
CKS2P33552 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC11.67□□□□□ -0.54
CKS2P33552 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC11.67□□□□□ -0.54
CKS2P33552 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CKS2P33552 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
CKS2P33552 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC11.67□□□□□ -0.54
CKS2P33552 AC015656.1-201ENST00000624209 3578 ntBASIC11.67□□□□□ -0.54
CKS2P33552 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CKS2P33552 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
CKS2P33552 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
CKS2P33552 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
CKS2P33552 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CKS2P33552 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
CKS2P33552 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
CKS2P33552 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CKS2P33552 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC11.67□□□□□ -0.54
CKS2P33552 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CKS2P33552 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CKS2P33552 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
CKS2P33552 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
CKS2P33552 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CKS2P33552 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CKS2P33552 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CKS2P33552 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC11.67□□□□□ -0.54
CKS2P33552 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CKS2P33552 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC11.67□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms