Protein–RNA interactions for Protein: P32239

CCKBR, Gastrin/cholecystokinin type B receptor, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCKBRP32239 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.15■□□□□ 0.02
CCKBRP32239 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.15■□□□□ 0.02
CCKBRP32239 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCKBRP32239 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCKBRP32239 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCKBRP32239 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CCKBRP32239 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCKBRP32239 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCKBRP32239 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.15■□□□□ 0.02
CCKBRP32239 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCKBRP32239 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
CCKBRP32239 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
CCKBRP32239 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CCKBRP32239 AC005229.1-201ENST00000392885 409 ntBASIC15.15■□□□□ 0.02
CCKBRP32239 SOCS2P1-201ENST00000417727 557 ntBASIC15.15■□□□□ 0.02
CCKBRP32239 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.15■□□□□ 0.02
CCKBRP32239 AC134915.1-201ENST00000426461 574 ntBASIC15.15■□□□□ 0.02
CCKBRP32239 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.15■□□□□ 0.02
CCKBRP32239 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.15■□□□□ 0.02
CCKBRP32239 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CCKBRP32239 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CCKBRP32239 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC15.15■□□□□ 0.02
CCKBRP32239 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.15■□□□□ 0.02
CCKBRP32239 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.15■□□□□ 0.02
CCKBRP32239 PTP4A1P2-201ENST00000546033 454 ntBASIC15.15■□□□□ 0.02
CCKBRP32239 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC15.15■□□□□ 0.02
CCKBRP32239 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.15■□□□□ 0.02
CCKBRP32239 AC124283.3-201ENST00000570869 594 ntBASIC15.15■□□□□ 0.02
CCKBRP32239 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC15.15■□□□□ 0.02
CCKBRP32239 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.15■□□□□ 0.02
CCKBRP32239 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.15■□□□□ 0.02
CCKBRP32239 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.15■□□□□ 0.02
CCKBRP32239 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.15■□□□□ 0.02
CCKBRP32239 REXO1L6P-201ENST00000603433 1515 ntBASIC15.15■□□□□ 0.02
CCKBRP32239 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCKBRP32239 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CCKBRP32239 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCKBRP32239 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCKBRP32239 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCKBRP32239 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCKBRP32239 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCKBRP32239 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
CCKBRP32239 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCKBRP32239 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCKBRP32239 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCKBRP32239 AC008894.3-201ENST00000624324 3103 ntBASIC15.15■□□□□ 0.02
CCKBRP32239 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CCKBRP32239 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCKBRP32239 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCKBRP32239 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCKBRP32239 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCKBRP32239 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCKBRP32239 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.14■□□□□ 0.01
CCKBRP32239 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCKBRP32239 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.14■□□□□ 0.01
CCKBRP32239 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CCKBRP32239 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCKBRP32239 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCKBRP32239 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.14■□□□□ 0.01
CCKBRP32239 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CCKBRP32239 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCKBRP32239 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCKBRP32239 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
CCKBRP32239 CTBP2P5-201ENST00000454986 1264 ntBASIC15.14■□□□□ 0.01
CCKBRP32239 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCKBRP32239 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.14■□□□□ 0.01
CCKBRP32239 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.14■□□□□ 0.01
CCKBRP32239 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.14■□□□□ 0.01
CCKBRP32239 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCKBRP32239 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CCKBRP32239 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.14■□□□□ 0.01
CCKBRP32239 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCKBRP32239 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCKBRP32239 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.14■□□□□ 0.01
CCKBRP32239 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCKBRP32239 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCKBRP32239 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCKBRP32239 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCKBRP32239 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
CCKBRP32239 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCKBRP32239 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.14■□□□□ 0.01
CCKBRP32239 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
CCKBRP32239 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCKBRP32239 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.14■□□□□ 0.01
CCKBRP32239 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.14■□□□□ 0.01
CCKBRP32239 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCKBRP32239 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCKBRP32239 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCKBRP32239 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCKBRP32239 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CCKBRP32239 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.13■□□□□ 0.01
CCKBRP32239 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CCKBRP32239 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CCKBRP32239 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCKBRP32239 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCKBRP32239 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.13■□□□□ 0.01
CCKBRP32239 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCKBRP32239 AC063926.3-201ENST00000624734 5658 ntBASIC15.13■□□□□ 0.01
CCKBRP32239 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCKBRP32239 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms