Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AC244197.1-201ENST00000456494 951 ntBASIC20.15■□□□□ 0.82
RXRBP28702 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC20.15■□□□□ 0.82
RXRBP28702 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC20.15■□□□□ 0.82
RXRBP28702 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC20.15■□□□□ 0.82
RXRBP28702 MIR3180-2-201ENST00000581748 88 ntBASIC20.15■□□□□ 0.82
RXRBP28702 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC20.15■□□□□ 0.82
RXRBP28702 LINC01783-202ENST00000614408 828 ntBASIC20.15■□□□□ 0.82
RXRBP28702 BX284668.2-205ENST00000619677 828 ntBASIC20.15■□□□□ 0.82
RXRBP28702 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RXRBP28702 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
RXRBP28702 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC20.15■□□□□ 0.82
RXRBP28702 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC20.15■□□□□ 0.82
RXRBP28702 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
RXRBP28702 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.15■□□□□ 0.82
RXRBP28702 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
RXRBP28702 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RXRBP28702 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RXRBP28702 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
RXRBP28702 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
RXRBP28702 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
RXRBP28702 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC20.14■□□□□ 0.82
RXRBP28702 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
RXRBP28702 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RXRBP28702 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RXRBP28702 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
RXRBP28702 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC20.14■□□□□ 0.81
RXRBP28702 FAM90A7P-201ENST00000382628 1395 ntBASIC20.14■□□□□ 0.81
RXRBP28702 FAM90A23P-201ENST00000400136 1395 ntBASIC20.14■□□□□ 0.81
RXRBP28702 FAM90A21P-201ENST00000510875 1396 ntBASIC20.14■□□□□ 0.81
RXRBP28702 FAM90A15P-201ENST00000514465 1395 ntBASIC20.14■□□□□ 0.81
RXRBP28702 FAM90A6P-201ENST00000515148 1394 ntBASIC20.14■□□□□ 0.81
RXRBP28702 FAM90A16P-201ENST00000526662 1395 ntBASIC20.14■□□□□ 0.81
RXRBP28702 FAM90A9P-201ENST00000527940 1395 ntBASIC20.14■□□□□ 0.81
RXRBP28702 FAM90A5P-201ENST00000528738 1395 ntBASIC20.14■□□□□ 0.81
RXRBP28702 FAM90A14P-201ENST00000530386 1395 ntBASIC20.14■□□□□ 0.81
RXRBP28702 FAM90A13P-201ENST00000534703 1395 ntBASIC20.14■□□□□ 0.81
RXRBP28702 CLUHP2-201ENST00000426660 1303 ntBASIC20.14■□□□□ 0.81
RXRBP28702 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC20.14■□□□□ 0.81
RXRBP28702 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC20.14■□□□□ 0.81
RXRBP28702 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC20.14■□□□□ 0.81
RXRBP28702 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.81
RXRBP28702 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
RXRBP28702 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC20.14■□□□□ 0.81
RXRBP28702 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC20.14■□□□□ 0.81
RXRBP28702 DUX4L46-201ENST00000566845 751 ntBASIC20.14■□□□□ 0.81
RXRBP28702 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC20.14■□□□□ 0.81
RXRBP28702 AC004686.1-201ENST00000605113 538 ntBASIC20.14■□□□□ 0.81
RXRBP28702 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
RXRBP28702 AL451007.2-201ENST00000632004 563 ntBASIC20.14■□□□□ 0.81
RXRBP28702 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC20.14■□□□□ 0.81
RXRBP28702 ZNF436-AS1-201ENST00000335648 2547 ntBASIC20.14■□□□□ 0.81
RXRBP28702 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RXRBP28702 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RXRBP28702 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RXRBP28702 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RXRBP28702 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.14■□□□□ 0.81
RXRBP28702 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RXRBP28702 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RXRBP28702 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RXRBP28702 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RXRBP28702 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC20.13■□□□□ 0.81
RXRBP28702 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC20.13■□□□□ 0.81
RXRBP28702 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC20.13■□□□□ 0.81
RXRBP28702 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC20.13■□□□□ 0.81
RXRBP28702 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RXRBP28702 AC104581.1-202ENST00000635932 2618 ntBASIC20.13■□□□□ 0.81
RXRBP28702 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
RXRBP28702 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
RXRBP28702 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RXRBP28702 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RXRBP28702 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RXRBP28702 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC20.13■□□□□ 0.81
RXRBP28702 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC20.13■□□□□ 0.81
RXRBP28702 RN7SL470P-201ENST00000583069 259 ntBASIC20.13■□□□□ 0.81
RXRBP28702 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC20.13■□□□□ 0.81
RXRBP28702 SIGLEC18P-201ENST00000602271 909 ntBASIC20.13■□□□□ 0.81
RXRBP28702 MEG3_2.1-201ENST00000611456 105 ntBASIC20.13■□□□□ 0.81
RXRBP28702 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
RXRBP28702 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC20.13■□□□□ 0.81
RXRBP28702 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
RXRBP28702 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
RXRBP28702 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RXRBP28702 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.13■□□□□ 0.81
RXRBP28702 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RXRBP28702 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
RXRBP28702 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RXRBP28702 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.13■□□□□ 0.81
RXRBP28702 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RXRBP28702 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RXRBP28702 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RXRBP28702 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
RXRBP28702 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RXRBP28702 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
RXRBP28702 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC20.13■□□□□ 0.81
RXRBP28702 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC20.13■□□□□ 0.81
RXRBP28702 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RXRBP28702 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC20.12■□□□□ 0.81
RXRBP28702 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC20.12■□□□□ 0.81
RXRBP28702 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RXRBP28702 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms