Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GDF1P27539 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
GDF1P27539 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
GDF1P27539 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
GDF1P27539 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
GDF1P27539 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.31□□□□□ -0.12
GDF1P27539 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GDF1P27539 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GDF1P27539 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
GDF1P27539 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.31□□□□□ -0.12
GDF1P27539 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
GDF1P27539 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GDF1P27539 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
GDF1P27539 AC018695.7-201ENST00000624587 2492 ntBASIC14.31□□□□□ -0.12
GDF1P27539 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GDF1P27539 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GDF1P27539 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
GDF1P27539 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.31□□□□□ -0.12
GDF1P27539 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
GDF1P27539 KRT18P64-201ENST00000434946 1219 ntBASIC14.31□□□□□ -0.12
GDF1P27539 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.31□□□□□ -0.12
GDF1P27539 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GDF1P27539 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
GDF1P27539 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.31□□□□□ -0.12
GDF1P27539 AC097359.3-201ENST00000603982 1210 ntBASIC14.31□□□□□ -0.12
GDF1P27539 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.31□□□□□ -0.12
GDF1P27539 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
GDF1P27539 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GDF1P27539 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.31□□□□□ -0.12
GDF1P27539 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
GDF1P27539 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GDF1P27539 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.31□□□□□ -0.12
GDF1P27539 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC14.31□□□□□ -0.12
GDF1P27539 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GDF1P27539 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.31□□□□□ -0.12
GDF1P27539 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GDF1P27539 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
GDF1P27539 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
GDF1P27539 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
GDF1P27539 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.3□□□□□ -0.12
GDF1P27539 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.3□□□□□ -0.12
GDF1P27539 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.3□□□□□ -0.12
GDF1P27539 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC14.3□□□□□ -0.12
GDF1P27539 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GDF1P27539 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.3□□□□□ -0.12
GDF1P27539 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.3□□□□□ -0.12
GDF1P27539 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
GDF1P27539 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
GDF1P27539 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GDF1P27539 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GDF1P27539 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
GDF1P27539 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GDF1P27539 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.3□□□□□ -0.12
GDF1P27539 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC14.3□□□□□ -0.12
GDF1P27539 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GDF1P27539 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
GDF1P27539 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC14.3□□□□□ -0.12
GDF1P27539 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC14.3□□□□□ -0.12
GDF1P27539 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.3□□□□□ -0.12
GDF1P27539 GAPDHP21-201ENST00000450301 1010 ntBASIC14.3□□□□□ -0.12
GDF1P27539 RN7SL752P-201ENST00000463779 287 ntBASIC14.3□□□□□ -0.12
GDF1P27539 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC14.3□□□□□ -0.12
GDF1P27539 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.3□□□□□ -0.12
GDF1P27539 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.3□□□□□ -0.12
GDF1P27539 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
GDF1P27539 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.3□□□□□ -0.12
GDF1P27539 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.3□□□□□ -0.12
GDF1P27539 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
GDF1P27539 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.3□□□□□ -0.12
GDF1P27539 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
GDF1P27539 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
GDF1P27539 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
GDF1P27539 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
GDF1P27539 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GDF1P27539 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
GDF1P27539 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
GDF1P27539 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
GDF1P27539 CU639417.3-201ENST00000624240 1404 ntBASIC14.3□□□□□ -0.12
GDF1P27539 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.3□□□□□ -0.12
GDF1P27539 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
GDF1P27539 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
GDF1P27539 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GDF1P27539 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.3□□□□□ -0.12
GDF1P27539 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GDF1P27539 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GDF1P27539 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
GDF1P27539 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.3□□□□□ -0.12
GDF1P27539 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
GDF1P27539 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GDF1P27539 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
GDF1P27539 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.29□□□□□ -0.12
GDF1P27539 LINC02199-201ENST00000506655 2702 ntBASIC14.29□□□□□ -0.12
GDF1P27539 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
GDF1P27539 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
GDF1P27539 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GDF1P27539 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
GDF1P27539 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GDF1P27539 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
GDF1P27539 AC024909.3-201ENST00000611513 2257 ntBASIC14.29□□□□□ -0.12
GDF1P27539 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms