Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC13.58□□□□□ -0.24
CCL1P22362 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CCL1P22362 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
CCL1P22362 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCL1P22362 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCL1P22362 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CCL1P22362 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCL1P22362 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCL1P22362 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCL1P22362 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.58□□□□□ -0.24
CCL1P22362 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCL1P22362 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.58□□□□□ -0.24
CCL1P22362 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CCL1P22362 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCL1P22362 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCL1P22362 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCL1P22362 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCL1P22362 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCL1P22362 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCL1P22362 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
CCL1P22362 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCL1P22362 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.57□□□□□ -0.24
CCL1P22362 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCL1P22362 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CCL1P22362 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCL1P22362 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
CCL1P22362 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CCL1P22362 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCL1P22362 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCL1P22362 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC13.57□□□□□ -0.24
CCL1P22362 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCL1P22362 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCL1P22362 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CCL1P22362 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCL1P22362 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCL1P22362 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CCL1P22362 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CCL1P22362 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.57□□□□□ -0.24
CCL1P22362 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCL1P22362 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCL1P22362 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCL1P22362 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCL1P22362 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCL1P22362 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCL1P22362 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.57□□□□□ -0.24
CCL1P22362 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC13.57□□□□□ -0.24
CCL1P22362 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC13.57□□□□□ -0.24
CCL1P22362 TARDBPP1-201ENST00000442013 1203 ntBASIC13.57□□□□□ -0.24
CCL1P22362 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.57□□□□□ -0.24
CCL1P22362 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.57□□□□□ -0.24
CCL1P22362 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC13.57□□□□□ -0.24
CCL1P22362 MIR4469-201ENST00000583919 79 ntBASIC13.57□□□□□ -0.24
CCL1P22362 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC13.57□□□□□ -0.24
CCL1P22362 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.57□□□□□ -0.24
CCL1P22362 AC009093.7-201ENST00000623853 1223 ntBASIC13.57□□□□□ -0.24
CCL1P22362 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CCL1P22362 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CCL1P22362 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.57□□□□□ -0.24
CCL1P22362 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.57□□□□□ -0.24
CCL1P22362 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CCL1P22362 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CCL1P22362 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.57□□□□□ -0.24
CCL1P22362 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.57□□□□□ -0.24
CCL1P22362 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CCL1P22362 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCL1P22362 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCL1P22362 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CCL1P22362 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCL1P22362 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CCL1P22362 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CCL1P22362 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CCL1P22362 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCL1P22362 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCL1P22362 WASH3P-207ENST00000560956 1394 ntBASIC13.57□□□□□ -0.24
CCL1P22362 FO538757.1-201ENST00000623083 1397 ntBASIC13.57□□□□□ -0.24
CCL1P22362 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCL1P22362 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCL1P22362 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCL1P22362 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.56□□□□□ -0.24
CCL1P22362 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.56□□□□□ -0.24
CCL1P22362 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.56□□□□□ -0.24
CCL1P22362 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCL1P22362 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCL1P22362 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CCL1P22362 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CCL1P22362 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCL1P22362 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CCL1P22362 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.56□□□□□ -0.24
CCL1P22362 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCL1P22362 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCL1P22362 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCL1P22362 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CCL1P22362 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.56□□□□□ -0.24
CCL1P22362 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCL1P22362 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CCL1P22362 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC13.56□□□□□ -0.24
CCL1P22362 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC13.56□□□□□ -0.24
CCL1P22362 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC13.56□□□□□ -0.24
CCL1P22362 RBPMS2P1-201ENST00000437762 623 ntBASIC13.56□□□□□ -0.24
CCL1P22362 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms