Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CAPN3P20807 TSEN15P1-201ENST00000423257 515 ntBASIC15.26■□□□□ 0.03
CAPN3P20807 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.26■□□□□ 0.03
CAPN3P20807 AC140658.5-201ENST00000438532 169 ntBASIC15.26■□□□□ 0.03
CAPN3P20807 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CAPN3P20807 AP000344.2-201ENST00000512987 629 ntBASIC15.26■□□□□ 0.03
CAPN3P20807 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.26■□□□□ 0.03
CAPN3P20807 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.26■□□□□ 0.03
CAPN3P20807 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.26■□□□□ 0.03
CAPN3P20807 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CAPN3P20807 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CAPN3P20807 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
CAPN3P20807 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
CAPN3P20807 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CAPN3P20807 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CAPN3P20807 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CAPN3P20807 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.26■□□□□ 0.03
CAPN3P20807 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CAPN3P20807 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CAPN3P20807 AC127383.1-201ENST00000444697 1800 ntBASIC15.26■□□□□ 0.03
CAPN3P20807 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CAPN3P20807 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.26■□□□□ 0.03
CAPN3P20807 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CAPN3P20807 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CAPN3P20807 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.26■□□□□ 0.03
CAPN3P20807 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.26■□□□□ 0.03
CAPN3P20807 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CAPN3P20807 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CAPN3P20807 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CAPN3P20807 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CAPN3P20807 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CAPN3P20807 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CAPN3P20807 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CAPN3P20807 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CAPN3P20807 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CAPN3P20807 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CAPN3P20807 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.25■□□□□ 0.03
CAPN3P20807 LINC00528-201ENST00000600723 2160 ntBASIC15.25■□□□□ 0.03
CAPN3P20807 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CAPN3P20807 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CAPN3P20807 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CAPN3P20807 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
CAPN3P20807 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CAPN3P20807 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CAPN3P20807 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CAPN3P20807 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CAPN3P20807 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.25■□□□□ 0.03
CAPN3P20807 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
CAPN3P20807 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CAPN3P20807 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.25■□□□□ 0.03
CAPN3P20807 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CAPN3P20807 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CAPN3P20807 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CAPN3P20807 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.25■□□□□ 0.03
CAPN3P20807 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.25■□□□□ 0.03
CAPN3P20807 TAF8-206ENST00000472818 719 ntTSL 2 BASIC15.25■□□□□ 0.03
CAPN3P20807 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
CAPN3P20807 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.25■□□□□ 0.03
CAPN3P20807 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CAPN3P20807 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.25■□□□□ 0.03
CAPN3P20807 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.25■□□□□ 0.03
CAPN3P20807 AC004449.1-201ENST00000564240 433 ntBASIC15.25■□□□□ 0.03
CAPN3P20807 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CAPN3P20807 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CAPN3P20807 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.25■□□□□ 0.03
CAPN3P20807 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CAPN3P20807 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.25■□□□□ 0.03
CAPN3P20807 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CAPN3P20807 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CAPN3P20807 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.25■□□□□ 0.03
CAPN3P20807 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.25■□□□□ 0.03
CAPN3P20807 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CAPN3P20807 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CAPN3P20807 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CAPN3P20807 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CAPN3P20807 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CAPN3P20807 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CAPN3P20807 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.25■□□□□ 0.03
CAPN3P20807 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CAPN3P20807 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CAPN3P20807 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.25■□□□□ 0.03
CAPN3P20807 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CAPN3P20807 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CAPN3P20807 AC007292.2-201ENST00000593524 1812 ntBASIC15.24■□□□□ 0.03
CAPN3P20807 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.24■□□□□ 0.03
CAPN3P20807 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CAPN3P20807 BNIP3P1-202ENST00000550043 1585 ntBASIC15.24■□□□□ 0.03
CAPN3P20807 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CAPN3P20807 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.24■□□□□ 0.03
CAPN3P20807 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
CAPN3P20807 AC063926.2-201ENST00000623766 1308 ntBASIC15.24■□□□□ 0.03
CAPN3P20807 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CAPN3P20807 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.24■□□□□ 0.03
CAPN3P20807 AC126365.1-201ENST00000578585 1514 ntBASIC15.24■□□□□ 0.03
CAPN3P20807 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CAPN3P20807 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.24■□□□□ 0.03
CAPN3P20807 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CAPN3P20807 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
CAPN3P20807 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CAPN3P20807 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms