Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
NCLP19338 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.92■□□□□ 0.62
NCLP19338 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC18.92■□□□□ 0.62
NCLP19338 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC18.92■□□□□ 0.62
NCLP19338 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
NCLP19338 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
NCLP19338 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NCLP19338 AC020658.6-201ENST00000623564 1870 ntBASIC18.92■□□□□ 0.62
NCLP19338 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NCLP19338 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NCLP19338 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NCLP19338 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NCLP19338 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NCLP19338 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NCLP19338 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NCLP19338 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
NCLP19338 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC18.91■□□□□ 0.62
NCLP19338 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
NCLP19338 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NCLP19338 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
NCLP19338 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
NCLP19338 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
NCLP19338 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.91■□□□□ 0.62
NCLP19338 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC18.91■□□□□ 0.62
NCLP19338 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
NCLP19338 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NCLP19338 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.91■□□□□ 0.62
NCLP19338 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC18.91■□□□□ 0.62
NCLP19338 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.91■□□□□ 0.62
NCLP19338 IGHV3-65-201ENST00000523210 341 ntBASIC18.91■□□□□ 0.62
NCLP19338 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.91■□□□□ 0.62
NCLP19338 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NCLP19338 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.91■□□□□ 0.62
NCLP19338 AC040169.1-201ENST00000565382 521 ntBASIC18.91■□□□□ 0.62
NCLP19338 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC18.91■□□□□ 0.62
NCLP19338 AC008667.4-201ENST00000607370 168 ntBASIC18.91■□□□□ 0.62
NCLP19338 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC18.91■□□□□ 0.62
NCLP19338 FAM45BP-202ENST00000592932 1624 ntBASIC18.91■□□□□ 0.62
NCLP19338 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
NCLP19338 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NCLP19338 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NCLP19338 API5-202ENST00000420461 2009 ntTSL 2 BASIC18.91■□□□□ 0.62
NCLP19338 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NCLP19338 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NCLP19338 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NCLP19338 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC18.91■□□□□ 0.62
NCLP19338 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
NCLP19338 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NCLP19338 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NCLP19338 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.91■□□□□ 0.62
NCLP19338 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NCLP19338 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NCLP19338 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NCLP19338 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
NCLP19338 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NCLP19338 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC18.9■□□□□ 0.62
NCLP19338 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NCLP19338 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC18.9■□□□□ 0.62
NCLP19338 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
NCLP19338 CICP24-201ENST00000605464 2705 ntBASIC18.9■□□□□ 0.62
NCLP19338 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
NCLP19338 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NCLP19338 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NCLP19338 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NCLP19338 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
NCLP19338 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NCLP19338 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
NCLP19338 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.9■□□□□ 0.62
NCLP19338 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.9■□□□□ 0.62
NCLP19338 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC18.9■□□□□ 0.62
NCLP19338 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
NCLP19338 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.9■□□□□ 0.62
NCLP19338 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.9■□□□□ 0.62
NCLP19338 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.9■□□□□ 0.62
NCLP19338 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.9■□□□□ 0.62
NCLP19338 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.9■□□□□ 0.62
NCLP19338 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.9■□□□□ 0.62
NCLP19338 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.9■□□□□ 0.62
NCLP19338 AC064836.3-201ENST00000607928 673 ntBASIC18.9■□□□□ 0.62
NCLP19338 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC18.9■□□□□ 0.62
NCLP19338 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
NCLP19338 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC18.9■□□□□ 0.62
NCLP19338 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
NCLP19338 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NCLP19338 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NCLP19338 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
NCLP19338 AC139749.1-202ENST00000617529 3139 ntBASIC18.89■□□□□ 0.62
NCLP19338 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC18.89■□□□□ 0.62
NCLP19338 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.62
NCLP19338 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
NCLP19338 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC18.89■□□□□ 0.62
NCLP19338 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NCLP19338 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC18.89■□□□□ 0.61
NCLP19338 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
NCLP19338 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
NCLP19338 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC18.89■□□□□ 0.61
NCLP19338 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
NCLP19338 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NCLP19338 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NCLP19338 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms