Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NCK1P16333 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NCK1P16333 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NCK1P16333 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NCK1P16333 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
NCK1P16333 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
NCK1P16333 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.98□□□□□ -0.01
NCK1P16333 BNIP3P1-202ENST00000550043 1585 ntBASIC14.98□□□□□ -0.01
NCK1P16333 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NCK1P16333 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.98□□□□□ -0.01
NCK1P16333 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NCK1P16333 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.98□□□□□ -0.01
NCK1P16333 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NCK1P16333 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NCK1P16333 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NCK1P16333 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.98□□□□□ -0.01
NCK1P16333 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NCK1P16333 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
NCK1P16333 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
NCK1P16333 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NCK1P16333 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
NCK1P16333 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
NCK1P16333 FAM197Y8-203ENST00000450145 560 ntBASIC14.98□□□□□ -0.01
NCK1P16333 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC14.98□□□□□ -0.01
NCK1P16333 AC018712.1-201ENST00000455767 687 ntBASIC14.98□□□□□ -0.01
NCK1P16333 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
NCK1P16333 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.98□□□□□ -0.01
NCK1P16333 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.98□□□□□ -0.01
NCK1P16333 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC14.98□□□□□ -0.01
NCK1P16333 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NCK1P16333 AC148477.8-201ENST00000624298 468 ntBASIC14.98□□□□□ -0.01
NCK1P16333 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC14.98□□□□□ -0.01
NCK1P16333 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NCK1P16333 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
NCK1P16333 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.98□□□□□ -0.01
NCK1P16333 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NCK1P16333 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NCK1P16333 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC14.98□□□□□ -0.01
NCK1P16333 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.98□□□□□ -0.01
NCK1P16333 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NCK1P16333 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.98□□□□□ -0.01
NCK1P16333 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NCK1P16333 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NCK1P16333 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NCK1P16333 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NCK1P16333 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NCK1P16333 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NCK1P16333 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.98□□□□□ -0.01
NCK1P16333 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.98□□□□□ -0.01
NCK1P16333 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
NCK1P16333 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.97□□□□□ -0.01
NCK1P16333 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NCK1P16333 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.97□□□□□ -0.01
NCK1P16333 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
NCK1P16333 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NCK1P16333 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
NCK1P16333 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
NCK1P16333 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
NCK1P16333 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NCK1P16333 REXO1L1P-202ENST00000608646 1974 ntBASIC14.97□□□□□ -0.01
NCK1P16333 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NCK1P16333 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.97□□□□□ -0.01
NCK1P16333 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
NCK1P16333 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NCK1P16333 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NCK1P16333 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
NCK1P16333 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.97□□□□□ -0.01
NCK1P16333 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC14.97□□□□□ -0.01
NCK1P16333 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.97□□□□□ -0.01
NCK1P16333 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC14.97□□□□□ -0.01
NCK1P16333 AC092910.1-201ENST00000482027 1129 ntBASIC14.97□□□□□ -0.01
NCK1P16333 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NCK1P16333 TOLLIP-AS1-201ENST00000530897 939 ntBASIC14.97□□□□□ -0.01
NCK1P16333 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC14.97□□□□□ -0.01
NCK1P16333 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.97□□□□□ -0.01
NCK1P16333 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.97□□□□□ -0.01
NCK1P16333 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC14.97□□□□□ -0.01
NCK1P16333 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC14.97□□□□□ -0.01
NCK1P16333 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
NCK1P16333 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NCK1P16333 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.97□□□□□ -0.01
NCK1P16333 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NCK1P16333 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
NCK1P16333 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.97□□□□□ -0.01
NCK1P16333 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NCK1P16333 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
NCK1P16333 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NCK1P16333 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NCK1P16333 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NCK1P16333 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.97□□□□□ -0.01
NCK1P16333 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.97□□□□□ -0.01
NCK1P16333 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
NCK1P16333 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NCK1P16333 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NCK1P16333 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NCK1P16333 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NCK1P16333 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NCK1P16333 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.97□□□□□ -0.01
NCK1P16333 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NCK1P16333 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms