Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DOBP13765 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
HLA-DOBP13765 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DOBP13765 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DOBP13765 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DOBP13765 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DOBP13765 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DOBP13765 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DOBP13765 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
HLA-DOBP13765 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DOBP13765 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
HLA-DOBP13765 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DOBP13765 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.17□□□□□ -0.14
HLA-DOBP13765 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DOBP13765 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DOBP13765 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DOBP13765 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DOBP13765 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.17□□□□□ -0.14
HLA-DOBP13765 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DOBP13765 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.17□□□□□ -0.14
HLA-DOBP13765 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DOBP13765 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DOBP13765 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DOBP13765 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.17□□□□□ -0.14
HLA-DOBP13765 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DOBP13765 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DOBP13765 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DOBP13765 AC087481.3-201ENST00000602886 1894 ntBASIC14.17□□□□□ -0.14
HLA-DOBP13765 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.17□□□□□ -0.14
HLA-DOBP13765 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
HLA-DOBP13765 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
HLA-DOBP13765 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
HLA-DOBP13765 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DOBP13765 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DOBP13765 RPL37AP1-201ENST00000412502 279 ntBASIC14.17□□□□□ -0.14
HLA-DOBP13765 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DOBP13765 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DOBP13765 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.17□□□□□ -0.14
HLA-DOBP13765 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DOBP13765 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
HLA-DOBP13765 AC025678.2-201ENST00000562061 970 ntBASIC14.17□□□□□ -0.14
HLA-DOBP13765 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.17□□□□□ -0.14
HLA-DOBP13765 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.17□□□□□ -0.14
HLA-DOBP13765 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
HLA-DOBP13765 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DOBP13765 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DOBP13765 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DOBP13765 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.17□□□□□ -0.14
HLA-DOBP13765 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DOBP13765 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
HLA-DOBP13765 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
HLA-DOBP13765 CETN4P-206ENST00000642099 2168 ntBASIC14.17□□□□□ -0.14
HLA-DOBP13765 AC127383.1-201ENST00000444697 1800 ntBASIC14.17□□□□□ -0.14
HLA-DOBP13765 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DOBP13765 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DOBP13765 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.17□□□□□ -0.14
HLA-DOBP13765 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.17□□□□□ -0.14
HLA-DOBP13765 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DOBP13765 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DOBP13765 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DOBP13765 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
HLA-DOBP13765 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DOBP13765 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DOBP13765 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
HLA-DOBP13765 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DOBP13765 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DOBP13765 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.16□□□□□ -0.14
HLA-DOBP13765 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DOBP13765 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DOBP13765 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DOBP13765 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DOBP13765 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DOBP13765 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DOBP13765 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DOBP13765 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DOBP13765 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.16□□□□□ -0.14
HLA-DOBP13765 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DOBP13765 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.16□□□□□ -0.14
HLA-DOBP13765 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.16□□□□□ -0.14
HLA-DOBP13765 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DOBP13765 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.16□□□□□ -0.14
HLA-DOBP13765 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.16□□□□□ -0.14
HLA-DOBP13765 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
HLA-DOBP13765 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DOBP13765 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DOBP13765 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DOBP13765 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.16□□□□□ -0.14
HLA-DOBP13765 AL080243.2-201ENST00000418783 582 ntBASIC14.16□□□□□ -0.14
HLA-DOBP13765 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.16□□□□□ -0.14
HLA-DOBP13765 CNN2P2-201ENST00000443536 909 ntBASIC14.16□□□□□ -0.14
HLA-DOBP13765 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
HLA-DOBP13765 CNN2P3-201ENST00000450201 906 ntBASIC14.16□□□□□ -0.14
HLA-DOBP13765 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DOBP13765 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.16□□□□□ -0.14
HLA-DOBP13765 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.16□□□□□ -0.14
HLA-DOBP13765 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DOBP13765 AC104640.1-201ENST00000562617 2109 ntBASIC14.16□□□□□ -0.14
HLA-DOBP13765 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.16□□□□□ -0.14
HLA-DOBP13765 SPDYE12P-201ENST00000618416 771 ntBASIC14.16□□□□□ -0.14
HLA-DOBP13765 AL136317.3-201ENST00000618497 906 ntBASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms