Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 AC069224.1-201ENST00000566372 1715 ntBASIC26.28■■□□□ 1.8
CFTRP13569 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC26.28■■□□□ 1.8
CFTRP13569 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CFTRP13569 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CFTRP13569 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
CFTRP13569 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CFTRP13569 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
CFTRP13569 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC26.28■■□□□ 1.8
CFTRP13569 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CFTRP13569 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CFTRP13569 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CFTRP13569 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
CFTRP13569 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CFTRP13569 HNRNPA1P41-201ENST00000397777 928 ntBASIC26.28■■□□□ 1.8
CFTRP13569 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC26.28■■□□□ 1.8
CFTRP13569 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CFTRP13569 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC26.28■■□□□ 1.8
CFTRP13569 DNM1P30-201ENST00000563586 452 ntBASIC26.28■■□□□ 1.8
CFTRP13569 STUB1-204ENST00000564370 875 ntTSL 2 BASIC26.28■■□□□ 1.8
CFTRP13569 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC26.28■■□□□ 1.8
CFTRP13569 AC138696.2-201ENST00000607376 223 ntBASIC26.28■■□□□ 1.8
CFTRP13569 AL136301.1-201ENST00000615830 422 ntBASIC26.28■■□□□ 1.8
CFTRP13569 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC26.28■■□□□ 1.8
CFTRP13569 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC26.28■■□□□ 1.8
CFTRP13569 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CFTRP13569 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
CFTRP13569 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC26.28■■□□□ 1.8
CFTRP13569 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
CFTRP13569 FAM90A7P-201ENST00000382628 1395 ntBASIC26.27■■□□□ 1.8
CFTRP13569 FAM90A23P-201ENST00000400136 1395 ntBASIC26.27■■□□□ 1.8
CFTRP13569 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
CFTRP13569 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
CFTRP13569 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC26.27■■□□□ 1.8
CFTRP13569 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC26.27■■□□□ 1.8
CFTRP13569 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CFTRP13569 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC26.27■■□□□ 1.8
CFTRP13569 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC26.27■■□□□ 1.8
CFTRP13569 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC26.27■■□□□ 1.8
CFTRP13569 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC26.27■■□□□ 1.8
CFTRP13569 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
CFTRP13569 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
CFTRP13569 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC26.27■■□□□ 1.8
CFTRP13569 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC26.27■■□□□ 1.8
CFTRP13569 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC26.27■■□□□ 1.8
CFTRP13569 PTK2-225ENST00000520892 571 ntTSL 4 BASIC26.27■■□□□ 1.8
CFTRP13569 AC090857.1-201ENST00000527400 390 ntBASIC26.27■■□□□ 1.8
CFTRP13569 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC26.27■■□□□ 1.8
CFTRP13569 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
CFTRP13569 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CFTRP13569 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CFTRP13569 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
CFTRP13569 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC26.27■■□□□ 1.8
CFTRP13569 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CFTRP13569 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CFTRP13569 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC26.27■■□□□ 1.8
CFTRP13569 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC26.27■■□□□ 1.8
CFTRP13569 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC26.27■■□□□ 1.8
CFTRP13569 E2F3P2-201ENST00000447755 1422 ntBASIC26.27■■□□□ 1.8
CFTRP13569 TBC1D3J-201ENST00000620719 1426 ntBASIC26.27■■□□□ 1.8
CFTRP13569 DNAJB1P1-201ENST00000429417 1024 ntBASIC26.26■■□□□ 1.79
CFTRP13569 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC26.26■■□□□ 1.79
CFTRP13569 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC26.26■■□□□ 1.79
CFTRP13569 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC26.26■■□□□ 1.79
CFTRP13569 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC26.26■■□□□ 1.79
CFTRP13569 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC26.26■■□□□ 1.79
CFTRP13569 MIR6842-201ENST00000612539 65 ntBASIC26.26■■□□□ 1.79
CFTRP13569 AC242376.2-201ENST00000619355 883 ntBASIC26.26■■□□□ 1.79
CFTRP13569 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CFTRP13569 AC009093.2-202ENST00000620513 2079 ntBASIC26.26■■□□□ 1.79
CFTRP13569 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC26.26■■□□□ 1.79
CFTRP13569 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CFTRP13569 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC26.26■■□□□ 1.79
CFTRP13569 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC26.26■■□□□ 1.79
CFTRP13569 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
CFTRP13569 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
CFTRP13569 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
CFTRP13569 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CFTRP13569 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC26.25■■□□□ 1.79
CFTRP13569 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC26.25■■□□□ 1.79
CFTRP13569 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CFTRP13569 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CFTRP13569 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CFTRP13569 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CFTRP13569 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CFTRP13569 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CFTRP13569 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC26.25■■□□□ 1.79
CFTRP13569 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC26.25■■□□□ 1.79
CFTRP13569 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CFTRP13569 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC26.25■■□□□ 1.79
CFTRP13569 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC26.25■■□□□ 1.79
CFTRP13569 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC26.25■■□□□ 1.79
CFTRP13569 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC26.25■■□□□ 1.79
CFTRP13569 AC002472.3-201ENST00000640124 621 ntBASIC26.25■■□□□ 1.79
CFTRP13569 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
CFTRP13569 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CFTRP13569 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CFTRP13569 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CFTRP13569 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CFTRP13569 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CFTRP13569 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms