Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC17.73■□□□□ 0.43
PTPRFP10586 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC17.73■□□□□ 0.43
PTPRFP10586 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC17.73■□□□□ 0.43
PTPRFP10586 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC17.73■□□□□ 0.43
PTPRFP10586 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTPRFP10586 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC17.73■□□□□ 0.43
PTPRFP10586 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
PTPRFP10586 AF254983.2-201ENST00000612331 135 ntBASIC17.73■□□□□ 0.43
PTPRFP10586 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PTPRFP10586 AL603764.1-201ENST00000636452 321 ntBASIC17.73■□□□□ 0.43
PTPRFP10586 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTPRFP10586 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC17.73■□□□□ 0.43
PTPRFP10586 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.73■□□□□ 0.43
PTPRFP10586 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTPRFP10586 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
PTPRFP10586 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTPRFP10586 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PTPRFP10586 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
PTPRFP10586 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
PTPRFP10586 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC17.73■□□□□ 0.43
PTPRFP10586 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
PTPRFP10586 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTPRFP10586 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
PTPRFP10586 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTPRFP10586 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTPRFP10586 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PTPRFP10586 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC17.72■□□□□ 0.43
PTPRFP10586 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
PTPRFP10586 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.72■□□□□ 0.43
PTPRFP10586 GGCT-203ENST00000409144 836 ntTSL 2 BASIC17.72■□□□□ 0.43
PTPRFP10586 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC17.72■□□□□ 0.43
PTPRFP10586 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC17.72■□□□□ 0.43
PTPRFP10586 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PTPRFP10586 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC17.72■□□□□ 0.43
PTPRFP10586 FGFR3P5-201ENST00000564496 886 ntBASIC17.72■□□□□ 0.43
PTPRFP10586 AC007663.3-201ENST00000609632 465 ntBASIC17.72■□□□□ 0.43
PTPRFP10586 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTPRFP10586 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC17.72■□□□□ 0.43
PTPRFP10586 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.72■□□□□ 0.43
PTPRFP10586 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PTPRFP10586 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTPRFP10586 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.72■□□□□ 0.43
PTPRFP10586 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
PTPRFP10586 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PTPRFP10586 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTPRFP10586 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.72■□□□□ 0.43
PTPRFP10586 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.72■□□□□ 0.43
PTPRFP10586 AL662844.4-201ENST00000606367 2838 ntBASIC17.72■□□□□ 0.43
PTPRFP10586 PTPA-217ENST00000434095 870 ntTSL 2 BASIC17.72■□□□□ 0.43
PTPRFP10586 AC245884.6-201ENST00000515672 1067 ntBASIC17.72■□□□□ 0.43
PTPRFP10586 FOS-206ENST00000555347 1280 ntTSL 2 BASIC17.72■□□□□ 0.43
PTPRFP10586 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC17.72■□□□□ 0.43
PTPRFP10586 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
PTPRFP10586 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC17.72■□□□□ 0.43
PTPRFP10586 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTPRFP10586 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTPRFP10586 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.72■□□□□ 0.43
PTPRFP10586 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTPRFP10586 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTPRFP10586 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PTPRFP10586 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTPRFP10586 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTPRFP10586 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.71■□□□□ 0.43
PTPRFP10586 AC112504.1-201ENST00000623415 1841 ntBASIC17.71■□□□□ 0.43
PTPRFP10586 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PTPRFP10586 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTPRFP10586 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTPRFP10586 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PTPRFP10586 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTPRFP10586 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC17.71■□□□□ 0.43
PTPRFP10586 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTPRFP10586 TPM3P8-201ENST00000330554 643 ntBASIC17.71■□□□□ 0.43
PTPRFP10586 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
PTPRFP10586 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC17.71■□□□□ 0.43
PTPRFP10586 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC17.71■□□□□ 0.43
PTPRFP10586 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC17.71■□□□□ 0.43
PTPRFP10586 AC244157.2-201ENST00000616239 1006 ntBASIC17.71■□□□□ 0.43
PTPRFP10586 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTPRFP10586 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTPRFP10586 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.71■□□□□ 0.43
PTPRFP10586 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
PTPRFP10586 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PTPRFP10586 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTPRFP10586 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTPRFP10586 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTPRFP10586 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.71■□□□□ 0.43
PTPRFP10586 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTPRFP10586 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PTPRFP10586 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
PTPRFP10586 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.71■□□□□ 0.43
PTPRFP10586 AC024909.3-201ENST00000611513 2257 ntBASIC17.71■□□□□ 0.43
PTPRFP10586 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
PTPRFP10586 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.71■□□□□ 0.42
PTPRFP10586 MIR769-201ENST00000390225 118 ntBASIC17.7■□□□□ 0.42
PTPRFP10586 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
PTPRFP10586 KRTAP19-9P-201ENST00000421795 191 ntBASIC17.7■□□□□ 0.42
PTPRFP10586 PTPA-218ENST00000435132 618 ntTSL 2 BASIC17.7■□□□□ 0.42
PTPRFP10586 NUP210P1-202ENST00000504322 710 ntBASIC17.7■□□□□ 0.42
PTPRFP10586 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC17.7■□□□□ 0.42
PTPRFP10586 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms