Protein–RNA interactions for Protein: P0DMS9

TMIGD3, Transmembrane domain-containing protein TMIGD3, humanhuman

Predicted RBP Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMIGD3P0DMS9 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TMIGD3P0DMS9 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TMIGD3P0DMS9 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.35□□□□□ -0.11
TMIGD3P0DMS9 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.35□□□□□ -0.11
TMIGD3P0DMS9 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.35□□□□□ -0.11
TMIGD3P0DMS9 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TMIGD3P0DMS9 CFL1-212ENST00000531413 636 ntTSL 3 BASIC14.35□□□□□ -0.11
TMIGD3P0DMS9 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.35□□□□□ -0.11
TMIGD3P0DMS9 AL512361.1-201ENST00000554200 418 ntBASIC14.35□□□□□ -0.11
TMIGD3P0DMS9 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.35□□□□□ -0.11
TMIGD3P0DMS9 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
TMIGD3P0DMS9 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.35□□□□□ -0.11
TMIGD3P0DMS9 MIR4321-201ENST00000592276 80 ntBASIC14.35□□□□□ -0.11
TMIGD3P0DMS9 CECR7-204ENST00000609932 568 ntTSL 2 BASIC14.35□□□□□ -0.11
TMIGD3P0DMS9 AL035252.4-201ENST00000624174 288 ntBASIC14.35□□□□□ -0.11
TMIGD3P0DMS9 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.35□□□□□ -0.11
TMIGD3P0DMS9 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.35□□□□□ -0.11
TMIGD3P0DMS9 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMIGD3P0DMS9 BTBD7P1-201ENST00000447253 1453 ntBASIC14.35□□□□□ -0.11
TMIGD3P0DMS9 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.35□□□□□ -0.11
TMIGD3P0DMS9 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMIGD3P0DMS9 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.35□□□□□ -0.11
TMIGD3P0DMS9 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
TMIGD3P0DMS9 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TMIGD3P0DMS9 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
TMIGD3P0DMS9 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMIGD3P0DMS9 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMIGD3P0DMS9 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TMIGD3P0DMS9 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMIGD3P0DMS9 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
TMIGD3P0DMS9 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMIGD3P0DMS9 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMIGD3P0DMS9 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.35□□□□□ -0.11
TMIGD3P0DMS9 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
TMIGD3P0DMS9 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMIGD3P0DMS9 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMIGD3P0DMS9 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMIGD3P0DMS9 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMIGD3P0DMS9 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMIGD3P0DMS9 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TMIGD3P0DMS9 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMIGD3P0DMS9 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMIGD3P0DMS9 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.34□□□□□ -0.11
TMIGD3P0DMS9 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMIGD3P0DMS9 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.34□□□□□ -0.11
TMIGD3P0DMS9 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.34□□□□□ -0.11
TMIGD3P0DMS9 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMIGD3P0DMS9 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.34□□□□□ -0.11
TMIGD3P0DMS9 ZNF890P-202ENST00000530367 1156 ntBASIC14.34□□□□□ -0.11
TMIGD3P0DMS9 AC010336.2-201ENST00000564226 506 ntBASIC14.34□□□□□ -0.11
TMIGD3P0DMS9 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TMIGD3P0DMS9 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.34□□□□□ -0.11
TMIGD3P0DMS9 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.34□□□□□ -0.11
TMIGD3P0DMS9 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.34□□□□□ -0.11
TMIGD3P0DMS9 AL662799.1-202ENST00000614205 422 ntBASIC14.34□□□□□ -0.11
TMIGD3P0DMS9 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.34□□□□□ -0.11
TMIGD3P0DMS9 MIR6069-201ENST00000620069 79 ntBASIC14.34□□□□□ -0.11
TMIGD3P0DMS9 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.34□□□□□ -0.11
TMIGD3P0DMS9 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.34□□□□□ -0.11
TMIGD3P0DMS9 AC004840.1-201ENST00000636359 365 ntBASIC14.34□□□□□ -0.11
TMIGD3P0DMS9 AL033527.5-202ENST00000641632 1098 ntBASIC14.34□□□□□ -0.11
TMIGD3P0DMS9 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMIGD3P0DMS9 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMIGD3P0DMS9 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMIGD3P0DMS9 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TMIGD3P0DMS9 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMIGD3P0DMS9 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.34□□□□□ -0.11
TMIGD3P0DMS9 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMIGD3P0DMS9 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMIGD3P0DMS9 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMIGD3P0DMS9 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.34□□□□□ -0.11
TMIGD3P0DMS9 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.34□□□□□ -0.11
TMIGD3P0DMS9 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMIGD3P0DMS9 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMIGD3P0DMS9 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMIGD3P0DMS9 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMIGD3P0DMS9 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
TMIGD3P0DMS9 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMIGD3P0DMS9 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
TMIGD3P0DMS9 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.34□□□□□ -0.11
TMIGD3P0DMS9 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMIGD3P0DMS9 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMIGD3P0DMS9 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TMIGD3P0DMS9 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
TMIGD3P0DMS9 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.11
TMIGD3P0DMS9 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.11
TMIGD3P0DMS9 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
TMIGD3P0DMS9 PPT1-215ENST00000641471 2368 ntBASIC14.33□□□□□ -0.11
TMIGD3P0DMS9 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TMIGD3P0DMS9 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.11
TMIGD3P0DMS9 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
TMIGD3P0DMS9 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
TMIGD3P0DMS9 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
TMIGD3P0DMS9 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
TMIGD3P0DMS9 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
TMIGD3P0DMS9 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
TMIGD3P0DMS9 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TMIGD3P0DMS9 CDC14C-201ENST00000428251 1719 ntBASIC14.33□□□□□ -0.12
TMIGD3P0DMS9 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.12
TMIGD3P0DMS9 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms