Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SFTPBP07988 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.82□□□□□ -0.2
SFTPBP07988 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC13.82□□□□□ -0.2
SFTPBP07988 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
SFTPBP07988 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SFTPBP07988 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SFTPBP07988 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.82□□□□□ -0.2
SFTPBP07988 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SFTPBP07988 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SFTPBP07988 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
SFTPBP07988 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SFTPBP07988 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SFTPBP07988 AP006288.1-201ENST00000446065 395 ntBASIC13.82□□□□□ -0.2
SFTPBP07988 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SFTPBP07988 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC13.82□□□□□ -0.2
SFTPBP07988 SNHG9-202ENST00000564014 471 ntBASIC13.82□□□□□ -0.2
SFTPBP07988 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC13.82□□□□□ -0.2
SFTPBP07988 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC13.82□□□□□ -0.2
SFTPBP07988 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SFTPBP07988 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SFTPBP07988 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SFTPBP07988 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC13.82□□□□□ -0.2
SFTPBP07988 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SFTPBP07988 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.82□□□□□ -0.2
SFTPBP07988 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
SFTPBP07988 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
SFTPBP07988 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SFTPBP07988 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SFTPBP07988 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SFTPBP07988 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SFTPBP07988 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SFTPBP07988 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SFTPBP07988 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SFTPBP07988 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SFTPBP07988 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC13.82□□□□□ -0.2
SFTPBP07988 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SFTPBP07988 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
SFTPBP07988 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC13.81□□□□□ -0.2
SFTPBP07988 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.81□□□□□ -0.2
SFTPBP07988 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC13.81□□□□□ -0.2
SFTPBP07988 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SFTPBP07988 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SFTPBP07988 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
SFTPBP07988 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC13.81□□□□□ -0.2
SFTPBP07988 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
SFTPBP07988 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SFTPBP07988 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SFTPBP07988 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
SFTPBP07988 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
SFTPBP07988 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SFTPBP07988 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
SFTPBP07988 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
SFTPBP07988 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SFTPBP07988 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
SFTPBP07988 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC13.81□□□□□ -0.2
SFTPBP07988 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC13.81□□□□□ -0.2
SFTPBP07988 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC13.81□□□□□ -0.2
SFTPBP07988 URGCP-206ENST00000446958 365 ntTSL 2 BASIC13.81□□□□□ -0.2
SFTPBP07988 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC13.81□□□□□ -0.2
SFTPBP07988 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SFTPBP07988 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC13.81□□□□□ -0.2
SFTPBP07988 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
SFTPBP07988 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SFTPBP07988 AC112191.1-201ENST00000523689 701 ntBASIC13.81□□□□□ -0.2
SFTPBP07988 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC13.81□□□□□ -0.2
SFTPBP07988 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
SFTPBP07988 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC13.81□□□□□ -0.2
SFTPBP07988 QPRT-203ENST00000562473 579 ntTSL 3 BASIC13.81□□□□□ -0.2
SFTPBP07988 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC13.81□□□□□ -0.2
SFTPBP07988 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC13.81□□□□□ -0.2
SFTPBP07988 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC13.81□□□□□ -0.2
SFTPBP07988 CITED2-204ENST00000618718 901 ntTSL 2 BASIC13.81□□□□□ -0.2
SFTPBP07988 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SFTPBP07988 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
SFTPBP07988 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SFTPBP07988 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SFTPBP07988 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SFTPBP07988 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SFTPBP07988 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
SFTPBP07988 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SFTPBP07988 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
SFTPBP07988 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SFTPBP07988 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.81□□□□□ -0.2
SFTPBP07988 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.81□□□□□ -0.2
SFTPBP07988 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SFTPBP07988 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SFTPBP07988 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SFTPBP07988 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SFTPBP07988 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SFTPBP07988 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SFTPBP07988 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SFTPBP07988 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SFTPBP07988 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SFTPBP07988 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SFTPBP07988 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SFTPBP07988 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SFTPBP07988 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC13.8□□□□□ -0.2
SFTPBP07988 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SFTPBP07988 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SFTPBP07988 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms