Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DPB1P04440 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DPB1P04440 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
HLA-DPB1P04440 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HLA-DPB1P04440 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HLA-DPB1P04440 LINC00528-201ENST00000600723 2160 ntBASIC14.27□□□□□ -0.12
HLA-DPB1P04440 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HLA-DPB1P04440 AC232323.1-201ENST00000540724 2099 ntBASIC14.27□□□□□ -0.12
HLA-DPB1P04440 REXO1L5P-201ENST00000622260 2098 ntBASIC14.27□□□□□ -0.12
HLA-DPB1P04440 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HLA-DPB1P04440 AL390755.1-201ENST00000623716 2027 ntBASIC14.27□□□□□ -0.12
HLA-DPB1P04440 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HLA-DPB1P04440 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.27□□□□□ -0.12
HLA-DPB1P04440 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.27□□□□□ -0.12
HLA-DPB1P04440 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.27□□□□□ -0.12
HLA-DPB1P04440 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HLA-DPB1P04440 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HLA-DPB1P04440 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HLA-DPB1P04440 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HLA-DPB1P04440 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HLA-DPB1P04440 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
HLA-DPB1P04440 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.27□□□□□ -0.12
HLA-DPB1P04440 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
HLA-DPB1P04440 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-DPB1P04440 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-DPB1P04440 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.27□□□□□ -0.13
HLA-DPB1P04440 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-DPB1P04440 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-DPB1P04440 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-DPB1P04440 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
HLA-DPB1P04440 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC14.27□□□□□ -0.13
HLA-DPB1P04440 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.27□□□□□ -0.13
HLA-DPB1P04440 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.27□□□□□ -0.13
HLA-DPB1P04440 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.27□□□□□ -0.13
HLA-DPB1P04440 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.27□□□□□ -0.13
HLA-DPB1P04440 AL031432.2-201ENST00000566714 459 ntBASIC14.27□□□□□ -0.13
HLA-DPB1P04440 AL928711.1-201ENST00000570165 459 ntBASIC14.27□□□□□ -0.13
HLA-DPB1P04440 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.27□□□□□ -0.13
HLA-DPB1P04440 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.27□□□□□ -0.13
HLA-DPB1P04440 FAM197Y3-203ENST00000618346 717 ntBASIC14.27□□□□□ -0.13
HLA-DPB1P04440 AL513190.1-201ENST00000621254 727 ntBASIC14.27□□□□□ -0.13
HLA-DPB1P04440 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
HLA-DPB1P04440 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.27□□□□□ -0.13
HLA-DPB1P04440 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.27□□□□□ -0.13
HLA-DPB1P04440 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-DPB1P04440 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
HLA-DPB1P04440 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-DPB1P04440 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
HLA-DPB1P04440 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.27□□□□□ -0.13
HLA-DPB1P04440 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
HLA-DPB1P04440 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
HLA-DPB1P04440 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.27□□□□□ -0.13
HLA-DPB1P04440 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-DPB1P04440 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.27□□□□□ -0.13
HLA-DPB1P04440 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
HLA-DPB1P04440 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.27□□□□□ -0.13
HLA-DPB1P04440 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-DPB1P04440 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
HLA-DPB1P04440 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.27□□□□□ -0.13
HLA-DPB1P04440 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.26□□□□□ -0.13
HLA-DPB1P04440 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DPB1P04440 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
HLA-DPB1P04440 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DPB1P04440 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.26□□□□□ -0.13
HLA-DPB1P04440 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
HLA-DPB1P04440 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
HLA-DPB1P04440 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DPB1P04440 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
HLA-DPB1P04440 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DPB1P04440 AC092127.1-201ENST00000567093 3455 ntBASIC14.26□□□□□ -0.13
HLA-DPB1P04440 AGAP7P-201ENST00000582299 2062 ntBASIC14.26□□□□□ -0.13
HLA-DPB1P04440 AGAP14-201ENST00000624701 2060 ntBASIC14.26□□□□□ -0.13
HLA-DPB1P04440 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DPB1P04440 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.26□□□□□ -0.13
HLA-DPB1P04440 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.26□□□□□ -0.13
HLA-DPB1P04440 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.26□□□□□ -0.13
HLA-DPB1P04440 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.26□□□□□ -0.13
HLA-DPB1P04440 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DPB1P04440 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
HLA-DPB1P04440 AC023274.1-201ENST00000418278 595 ntBASIC14.26□□□□□ -0.13
HLA-DPB1P04440 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
HLA-DPB1P04440 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DPB1P04440 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DPB1P04440 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
HLA-DPB1P04440 KRT19P2-202ENST00000557173 1012 ntBASIC14.26□□□□□ -0.13
HLA-DPB1P04440 AL645728.2-201ENST00000641974 660 ntBASIC14.26□□□□□ -0.13
HLA-DPB1P04440 AC092865.6-201ENST00000642101 219 ntBASIC14.26□□□□□ -0.13
HLA-DPB1P04440 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.26□□□□□ -0.13
HLA-DPB1P04440 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DPB1P04440 AC007191.1-201ENST00000623179 2995 ntBASIC14.26□□□□□ -0.13
HLA-DPB1P04440 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
HLA-DPB1P04440 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DPB1P04440 AL359258.3-201ENST00000622910 2331 ntBASIC14.26□□□□□ -0.13
HLA-DPB1P04440 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DPB1P04440 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.26□□□□□ -0.13
HLA-DPB1P04440 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DPB1P04440 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
HLA-DPB1P04440 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DPB1P04440 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DPB1P04440 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms