Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC17.21■□□□□ 0.35
VTNP04004 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VTNP04004 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VTNP04004 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VTNP04004 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
VTNP04004 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VTNP04004 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC17.21■□□□□ 0.35
VTNP04004 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
VTNP04004 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
VTNP04004 AC026410.3-201ENST00000514280 936 ntBASIC17.21■□□□□ 0.35
VTNP04004 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC17.21■□□□□ 0.35
VTNP04004 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC17.21■□□□□ 0.35
VTNP04004 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
VTNP04004 PTP4A1P2-201ENST00000546033 454 ntBASIC17.21■□□□□ 0.35
VTNP04004 AC015910.1-201ENST00000579400 975 ntBASIC17.21■□□□□ 0.35
VTNP04004 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC17.21■□□□□ 0.35
VTNP04004 AC107373.2-201ENST00000607735 490 ntBASIC17.21■□□□□ 0.35
VTNP04004 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC17.21■□□□□ 0.35
VTNP04004 COX11-210ENST00000639671 696 ntBASIC17.21■□□□□ 0.35
VTNP04004 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.21■□□□□ 0.35
VTNP04004 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VTNP04004 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
VTNP04004 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VTNP04004 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
VTNP04004 PDIA3P1-201ENST00000471856 1510 ntBASIC17.21■□□□□ 0.34
VTNP04004 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.21■□□□□ 0.34
VTNP04004 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
VTNP04004 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
VTNP04004 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.21■□□□□ 0.34
VTNP04004 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.21■□□□□ 0.34
VTNP04004 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.21■□□□□ 0.34
VTNP04004 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.34
VTNP04004 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
VTNP04004 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
VTNP04004 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.2■□□□□ 0.34
VTNP04004 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VTNP04004 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
VTNP04004 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
VTNP04004 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
VTNP04004 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
VTNP04004 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC17.2■□□□□ 0.34
VTNP04004 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VTNP04004 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.2■□□□□ 0.34
VTNP04004 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
VTNP04004 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VTNP04004 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.2■□□□□ 0.34
VTNP04004 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
VTNP04004 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
VTNP04004 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
VTNP04004 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC17.2■□□□□ 0.34
VTNP04004 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
VTNP04004 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
VTNP04004 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC17.2■□□□□ 0.34
VTNP04004 AP001889.1-201ENST00000525414 633 ntBASIC17.2■□□□□ 0.34
VTNP04004 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
VTNP04004 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
VTNP04004 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC17.2■□□□□ 0.34
VTNP04004 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
VTNP04004 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.2■□□□□ 0.34
VTNP04004 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VTNP04004 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VTNP04004 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.2■□□□□ 0.34
VTNP04004 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
VTNP04004 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VTNP04004 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VTNP04004 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VTNP04004 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VTNP04004 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
VTNP04004 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.19■□□□□ 0.34
VTNP04004 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VTNP04004 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
VTNP04004 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VTNP04004 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC17.19■□□□□ 0.34
VTNP04004 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VTNP04004 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC17.19■□□□□ 0.34
VTNP04004 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
VTNP04004 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
VTNP04004 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
VTNP04004 KRT223P-202ENST00000449164 1292 ntBASIC17.19■□□□□ 0.34
VTNP04004 AC104989.1-201ENST00000519711 778 ntBASIC17.19■□□□□ 0.34
VTNP04004 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC17.19■□□□□ 0.34
VTNP04004 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC17.19■□□□□ 0.34
VTNP04004 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC17.19■□□□□ 0.34
VTNP04004 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
VTNP04004 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC17.19■□□□□ 0.34
VTNP04004 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC17.19■□□□□ 0.34
VTNP04004 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC17.19■□□□□ 0.34
VTNP04004 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC17.19■□□□□ 0.34
VTNP04004 AL022328.1-201ENST00000610050 478 ntBASIC17.19■□□□□ 0.34
VTNP04004 AC133552.6-201ENST00000613406 534 ntBASIC17.19■□□□□ 0.34
VTNP04004 RPS24-214ENST00000613865 538 ntTSL 5 BASIC17.19■□□□□ 0.34
VTNP04004 METTL26-214ENST00000614890 801 ntTSL 3 BASIC17.19■□□□□ 0.34
VTNP04004 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC17.19■□□□□ 0.34
VTNP04004 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
VTNP04004 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
VTNP04004 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC17.19■□□□□ 0.34
VTNP04004 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
VTNP04004 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VTNP04004 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VTNP04004 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms