Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
MT-ND1P03886 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.98□□□□□ -0.01
MT-ND1P03886 AP002469.2-201ENST00000531724 424 ntBASIC14.98□□□□□ -0.01
MT-ND1P03886 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
MT-ND1P03886 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.98□□□□□ -0.01
MT-ND1P03886 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
MT-ND1P03886 MIR3909-201ENST00000579518 119 ntBASIC14.98□□□□□ -0.01
MT-ND1P03886 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
MT-ND1P03886 IRF5-214ENST00000613821 595 ntTSL 5 BASIC14.98□□□□□ -0.01
MT-ND1P03886 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MT-ND1P03886 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MT-ND1P03886 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
MT-ND1P03886 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
MT-ND1P03886 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
MT-ND1P03886 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
MT-ND1P03886 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
MT-ND1P03886 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.98□□□□□ -0.01
MT-ND1P03886 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MT-ND1P03886 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
MT-ND1P03886 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
MT-ND1P03886 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.98□□□□□ -0.01
MT-ND1P03886 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
MT-ND1P03886 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.98□□□□□ -0.01
MT-ND1P03886 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MT-ND1P03886 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MT-ND1P03886 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
MT-ND1P03886 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
MT-ND1P03886 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MT-ND1P03886 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
MT-ND1P03886 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
MT-ND1P03886 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
MT-ND1P03886 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.97□□□□□ -0.01
MT-ND1P03886 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MT-ND1P03886 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
MT-ND1P03886 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MT-ND1P03886 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
MT-ND1P03886 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
MT-ND1P03886 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
MT-ND1P03886 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
MT-ND1P03886 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MT-ND1P03886 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MT-ND1P03886 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
MT-ND1P03886 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MT-ND1P03886 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
MT-ND1P03886 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.97□□□□□ -0.01
MT-ND1P03886 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
MT-ND1P03886 PMS2P4-201ENST00000412466 1052 ntBASIC14.97□□□□□ -0.01
MT-ND1P03886 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
MT-ND1P03886 AL450487.1-201ENST00000426799 995 ntBASIC14.97□□□□□ -0.01
MT-ND1P03886 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
MT-ND1P03886 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.97□□□□□ -0.01
MT-ND1P03886 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
MT-ND1P03886 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.97□□□□□ -0.01
MT-ND1P03886 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
MT-ND1P03886 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.97□□□□□ -0.01
MT-ND1P03886 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.97□□□□□ -0.01
MT-ND1P03886 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC14.97□□□□□ -0.01
MT-ND1P03886 AL031432.2-201ENST00000566714 459 ntBASIC14.97□□□□□ -0.01
MT-ND1P03886 AL928711.1-201ENST00000570165 459 ntBASIC14.97□□□□□ -0.01
MT-ND1P03886 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MT-ND1P03886 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.97□□□□□ -0.01
MT-ND1P03886 AC104692.2-201ENST00000603054 253 ntBASIC14.97□□□□□ -0.01
MT-ND1P03886 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.97□□□□□ -0.01
MT-ND1P03886 MIR7706-201ENST00000613747 67 ntBASIC14.97□□□□□ -0.01
MT-ND1P03886 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.97□□□□□ -0.01
MT-ND1P03886 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
MT-ND1P03886 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.97□□□□□ -0.01
MT-ND1P03886 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.97□□□□□ -0.01
MT-ND1P03886 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.97□□□□□ -0.01
MT-ND1P03886 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
MT-ND1P03886 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
MT-ND1P03886 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MT-ND1P03886 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MT-ND1P03886 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
MT-ND1P03886 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.97□□□□□ -0.01
MT-ND1P03886 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
MT-ND1P03886 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
MT-ND1P03886 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.97□□□□□ -0.01
MT-ND1P03886 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.97□□□□□ -0.01
MT-ND1P03886 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
MT-ND1P03886 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
MT-ND1P03886 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.97□□□□□ -0.01
MT-ND1P03886 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.97□□□□□ -0.01
MT-ND1P03886 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MT-ND1P03886 AC015656.1-201ENST00000624209 3578 ntBASIC14.96□□□□□ -0.01
MT-ND1P03886 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.96□□□□□ -0.01
MT-ND1P03886 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.96□□□□□ -0.01
MT-ND1P03886 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
MT-ND1P03886 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MT-ND1P03886 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MT-ND1P03886 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC14.96□□□□□ -0.01
MT-ND1P03886 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.96□□□□□ -0.01
MT-ND1P03886 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MT-ND1P03886 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
MT-ND1P03886 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MT-ND1P03886 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.96□□□□□ -0.01
MT-ND1P03886 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MT-ND1P03886 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MT-ND1P03886 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MT-ND1P03886 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms