Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL4A1P02462 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COL4A1P02462 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC18.89■□□□□ 0.61
COL4A1P02462 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COL4A1P02462 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC18.89■□□□□ 0.61
COL4A1P02462 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC18.89■□□□□ 0.61
COL4A1P02462 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COL4A1P02462 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC18.89■□□□□ 0.61
COL4A1P02462 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COL4A1P02462 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL4A1P02462 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
COL4A1P02462 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC18.89■□□□□ 0.61
COL4A1P02462 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC18.89■□□□□ 0.61
COL4A1P02462 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL4A1P02462 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.61
COL4A1P02462 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.89■□□□□ 0.61
COL4A1P02462 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
COL4A1P02462 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL4A1P02462 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
COL4A1P02462 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COL4A1P02462 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL4A1P02462 SDCCAG3P2-201ENST00000326105 1023 ntBASIC18.89■□□□□ 0.61
COL4A1P02462 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL4A1P02462 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COL4A1P02462 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC18.89■□□□□ 0.61
COL4A1P02462 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC18.89■□□□□ 0.61
COL4A1P02462 AC044849.1-201ENST00000519737 1188 ntBASIC18.89■□□□□ 0.61
COL4A1P02462 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC18.89■□□□□ 0.61
COL4A1P02462 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC18.89■□□□□ 0.61
COL4A1P02462 RN7SL713P-201ENST00000582127 302 ntBASIC18.89■□□□□ 0.61
COL4A1P02462 AL022328.3-201ENST00000607943 679 ntBASIC18.89■□□□□ 0.61
COL4A1P02462 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
COL4A1P02462 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.89■□□□□ 0.61
COL4A1P02462 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
COL4A1P02462 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL4A1P02462 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL4A1P02462 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COL4A1P02462 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
COL4A1P02462 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL4A1P02462 LRRC59-203ENST00000576448 1531 ntBASIC18.88■□□□□ 0.61
COL4A1P02462 AC015818.8-201ENST00000587907 1519 ntBASIC18.88■□□□□ 0.61
COL4A1P02462 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC18.88■□□□□ 0.61
COL4A1P02462 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COL4A1P02462 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
COL4A1P02462 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COL4A1P02462 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC18.88■□□□□ 0.61
COL4A1P02462 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL4A1P02462 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC18.88■□□□□ 0.61
COL4A1P02462 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
COL4A1P02462 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
COL4A1P02462 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL4A1P02462 PRORSD1P-202ENST00000563365 2154 ntBASIC18.88■□□□□ 0.61
COL4A1P02462 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COL4A1P02462 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL4A1P02462 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL4A1P02462 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL4A1P02462 HNRNPA1P32-201ENST00000396326 963 ntBASIC18.88■□□□□ 0.61
COL4A1P02462 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC18.88■□□□□ 0.61
COL4A1P02462 DEF8-202ENST00000418391 852 ntTSL 2 BASIC18.88■□□□□ 0.61
COL4A1P02462 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC18.88■□□□□ 0.61
COL4A1P02462 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC18.88■□□□□ 0.61
COL4A1P02462 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC18.88■□□□□ 0.61
COL4A1P02462 OR10B1P-201ENST00000601666 907 ntBASIC18.88■□□□□ 0.61
COL4A1P02462 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL4A1P02462 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
COL4A1P02462 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC18.88■□□□□ 0.61
COL4A1P02462 AL359258.3-201ENST00000622910 2331 ntBASIC18.88■□□□□ 0.61
COL4A1P02462 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC18.88■□□□□ 0.61
COL4A1P02462 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL4A1P02462 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL4A1P02462 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC18.87■□□□□ 0.61
COL4A1P02462 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC18.87■□□□□ 0.61
COL4A1P02462 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
COL4A1P02462 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
COL4A1P02462 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
COL4A1P02462 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
COL4A1P02462 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL4A1P02462 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL4A1P02462 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL4A1P02462 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
COL4A1P02462 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
COL4A1P02462 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
COL4A1P02462 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL4A1P02462 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL4A1P02462 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC18.87■□□□□ 0.61
COL4A1P02462 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC18.87■□□□□ 0.61
COL4A1P02462 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC18.87■□□□□ 0.61
COL4A1P02462 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC18.87■□□□□ 0.61
COL4A1P02462 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC18.87■□□□□ 0.61
COL4A1P02462 AC104982.3-201ENST00000581995 514 ntBASIC18.87■□□□□ 0.61
COL4A1P02462 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC18.87■□□□□ 0.61
COL4A1P02462 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
COL4A1P02462 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC18.87■□□□□ 0.61
COL4A1P02462 AL645728.2-202ENST00000641679 227 ntBASIC18.87■□□□□ 0.61
COL4A1P02462 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL4A1P02462 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL4A1P02462 CLUHP2-201ENST00000426660 1303 ntBASIC18.87■□□□□ 0.61
COL4A1P02462 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC18.87■□□□□ 0.61
COL4A1P02462 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
COL4A1P02462 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms