Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GGPS1O95749 AC018665.1-201ENST00000622927 1362 ntBASIC17.66■□□□□ 0.42
GGPS1O95749 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
GGPS1O95749 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.66■□□□□ 0.42
GGPS1O95749 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
GGPS1O95749 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
GGPS1O95749 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
GGPS1O95749 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
GGPS1O95749 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GGPS1O95749 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
GGPS1O95749 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
GGPS1O95749 AL139384.1-201ENST00000612143 3047 ntBASIC17.66■□□□□ 0.42
GGPS1O95749 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
GGPS1O95749 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
GGPS1O95749 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC17.66■□□□□ 0.42
GGPS1O95749 C1QBPP1-201ENST00000400117 770 ntBASIC17.66■□□□□ 0.42
GGPS1O95749 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
GGPS1O95749 ACTG1P3-201ENST00000431775 1114 ntBASIC17.66■□□□□ 0.42
GGPS1O95749 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC17.66■□□□□ 0.42
GGPS1O95749 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC17.66■□□□□ 0.42
GGPS1O95749 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC17.66■□□□□ 0.42
GGPS1O95749 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC17.66■□□□□ 0.42
GGPS1O95749 SLC25A47P1-201ENST00000531577 414 ntBASIC17.66■□□□□ 0.42
GGPS1O95749 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC17.66■□□□□ 0.42
GGPS1O95749 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
GGPS1O95749 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC17.66■□□□□ 0.42
GGPS1O95749 NAA38-206ENST00000576384 424 ntTSL 2 BASIC17.66■□□□□ 0.42
GGPS1O95749 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC17.66■□□□□ 0.42
GGPS1O95749 AC233724.13-201ENST00000598383 410 ntBASIC17.66■□□□□ 0.42
GGPS1O95749 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
GGPS1O95749 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GGPS1O95749 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GGPS1O95749 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
GGPS1O95749 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GGPS1O95749 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.66■□□□□ 0.42
GGPS1O95749 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GGPS1O95749 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GGPS1O95749 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GGPS1O95749 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GGPS1O95749 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC17.66■□□□□ 0.42
GGPS1O95749 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.65■□□□□ 0.42
GGPS1O95749 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
GGPS1O95749 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
GGPS1O95749 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
GGPS1O95749 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GGPS1O95749 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GGPS1O95749 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GGPS1O95749 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.65■□□□□ 0.42
GGPS1O95749 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
GGPS1O95749 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
GGPS1O95749 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.65■□□□□ 0.42
GGPS1O95749 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
GGPS1O95749 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
GGPS1O95749 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GGPS1O95749 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
GGPS1O95749 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GGPS1O95749 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.65■□□□□ 0.42
GGPS1O95749 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
GGPS1O95749 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GGPS1O95749 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GGPS1O95749 MGST3-203ENST00000367885 680 ntTSL 2 BASIC17.65■□□□□ 0.42
GGPS1O95749 APOA1-205ENST00000375329 927 ntTSL 2 BASIC17.65■□□□□ 0.42
GGPS1O95749 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC17.65■□□□□ 0.42
GGPS1O95749 AC119751.2-201ENST00000504529 210 ntBASIC17.65■□□□□ 0.42
GGPS1O95749 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
GGPS1O95749 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
GGPS1O95749 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC17.65■□□□□ 0.42
GGPS1O95749 ENPP7P5-201ENST00000541031 1031 ntBASIC17.65■□□□□ 0.42
GGPS1O95749 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC17.65■□□□□ 0.42
GGPS1O95749 MIR4259-201ENST00000584466 101 ntBASIC17.65■□□□□ 0.42
GGPS1O95749 GPX4-206ENST00000588919 803 ntTSL 2 BASIC17.65■□□□□ 0.42
GGPS1O95749 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
GGPS1O95749 MIR6775-201ENST00000617557 69 ntBASIC17.65■□□□□ 0.42
GGPS1O95749 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.65■□□□□ 0.42
GGPS1O95749 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GGPS1O95749 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
GGPS1O95749 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GGPS1O95749 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GGPS1O95749 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GGPS1O95749 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GGPS1O95749 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GGPS1O95749 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GGPS1O95749 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GGPS1O95749 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GGPS1O95749 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GGPS1O95749 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
GGPS1O95749 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
GGPS1O95749 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GGPS1O95749 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GGPS1O95749 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
GGPS1O95749 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.65■□□□□ 0.42
GGPS1O95749 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC17.64■□□□□ 0.42
GGPS1O95749 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
GGPS1O95749 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
GGPS1O95749 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.64■□□□□ 0.41
GGPS1O95749 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GGPS1O95749 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GGPS1O95749 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC17.64■□□□□ 0.41
GGPS1O95749 CYP2AB1P-202ENST00000454440 1456 ntBASIC17.64■□□□□ 0.41
GGPS1O95749 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms