Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
KDM4BO94953 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
KDM4BO94953 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
KDM4BO94953 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
KDM4BO94953 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
KDM4BO94953 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.98□□□□□ -0.17
KDM4BO94953 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
KDM4BO94953 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
KDM4BO94953 AC106881.1-201ENST00000605849 3329 ntBASIC13.97□□□□□ -0.17
KDM4BO94953 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KDM4BO94953 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
KDM4BO94953 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
KDM4BO94953 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
KDM4BO94953 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KDM4BO94953 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
KDM4BO94953 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.97□□□□□ -0.17
KDM4BO94953 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
KDM4BO94953 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
KDM4BO94953 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
KDM4BO94953 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.97□□□□□ -0.17
KDM4BO94953 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.97□□□□□ -0.17
KDM4BO94953 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
KDM4BO94953 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KDM4BO94953 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
KDM4BO94953 CSF3-203ENST00000394148 622 ntTSL 3 BASIC13.97□□□□□ -0.17
KDM4BO94953 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
KDM4BO94953 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC13.97□□□□□ -0.17
KDM4BO94953 CRYGEP-201ENST00000412192 528 ntBASIC13.97□□□□□ -0.17
KDM4BO94953 VMO1-203ENST00000416307 712 ntTSL 2 BASIC13.97□□□□□ -0.17
KDM4BO94953 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
KDM4BO94953 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC13.97□□□□□ -0.17
KDM4BO94953 UNC93B6-202ENST00000528242 690 ntBASIC13.97□□□□□ -0.17
KDM4BO94953 AC116407.3-201ENST00000623905 1129 ntBASIC13.97□□□□□ -0.17
KDM4BO94953 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.97□□□□□ -0.17
KDM4BO94953 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
KDM4BO94953 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
KDM4BO94953 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.97□□□□□ -0.17
KDM4BO94953 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KDM4BO94953 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.97□□□□□ -0.17
KDM4BO94953 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.97□□□□□ -0.17
KDM4BO94953 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KDM4BO94953 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
KDM4BO94953 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
KDM4BO94953 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC13.97□□□□□ -0.17
KDM4BO94953 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KDM4BO94953 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.97□□□□□ -0.17
KDM4BO94953 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
KDM4BO94953 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
KDM4BO94953 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
KDM4BO94953 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KDM4BO94953 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
KDM4BO94953 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
KDM4BO94953 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KDM4BO94953 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KDM4BO94953 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
KDM4BO94953 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KDM4BO94953 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
KDM4BO94953 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC13.96□□□□□ -0.17
KDM4BO94953 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
KDM4BO94953 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.96□□□□□ -0.17
KDM4BO94953 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
KDM4BO94953 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
KDM4BO94953 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
KDM4BO94953 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
KDM4BO94953 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
KDM4BO94953 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
KDM4BO94953 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC13.96□□□□□ -0.17
KDM4BO94953 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.96□□□□□ -0.17
KDM4BO94953 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
KDM4BO94953 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
KDM4BO94953 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
KDM4BO94953 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.96□□□□□ -0.17
KDM4BO94953 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.96□□□□□ -0.17
KDM4BO94953 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
KDM4BO94953 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
KDM4BO94953 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
KDM4BO94953 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC13.96□□□□□ -0.17
KDM4BO94953 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.96□□□□□ -0.17
KDM4BO94953 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC13.96□□□□□ -0.17
KDM4BO94953 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
KDM4BO94953 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
KDM4BO94953 IGLL3P-201ENST00000412472 434 ntBASIC13.96□□□□□ -0.17
KDM4BO94953 HCG4B-203ENST00000450128 991 ntBASIC13.96□□□□□ -0.17
KDM4BO94953 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.96□□□□□ -0.17
KDM4BO94953 RNA5SP419-201ENST00000515908 135 ntBASIC13.96□□□□□ -0.17
KDM4BO94953 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
KDM4BO94953 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
KDM4BO94953 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC13.96□□□□□ -0.17
KDM4BO94953 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
KDM4BO94953 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
KDM4BO94953 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
KDM4BO94953 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
KDM4BO94953 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
KDM4BO94953 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
KDM4BO94953 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
KDM4BO94953 AC067750.1-201ENST00000608826 6545 ntBASIC13.96□□□□□ -0.18
KDM4BO94953 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
KDM4BO94953 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
KDM4BO94953 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
KDM4BO94953 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms