Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCNKO75909 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC13.75□□□□□ -0.21
CCNKO75909 AC131212.3-201ENST00000624087 4219 ntBASIC13.75□□□□□ -0.21
CCNKO75909 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCNKO75909 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
CCNKO75909 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCNKO75909 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCNKO75909 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCNKO75909 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CCNKO75909 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCNKO75909 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CCNKO75909 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCNKO75909 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCNKO75909 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC13.75□□□□□ -0.21
CCNKO75909 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCNKO75909 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCNKO75909 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CCNKO75909 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCNKO75909 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC13.75□□□□□ -0.21
CCNKO75909 AP000523.1-201ENST00000398242 1049 ntBASIC13.75□□□□□ -0.21
CCNKO75909 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CCNKO75909 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CCNKO75909 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CCNKO75909 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC13.75□□□□□ -0.21
CCNKO75909 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC13.75□□□□□ -0.21
CCNKO75909 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC13.75□□□□□ -0.21
CCNKO75909 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC13.75□□□□□ -0.21
CCNKO75909 NAPSB-206ENST00000562112 1266 ntBASIC13.75□□□□□ -0.21
CCNKO75909 VPS72-207ENST00000640458 689 ntTSL 5 BASIC13.75□□□□□ -0.21
CCNKO75909 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCNKO75909 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
CCNKO75909 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CCNKO75909 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.75□□□□□ -0.21
CCNKO75909 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.75□□□□□ -0.21
CCNKO75909 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CCNKO75909 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.75□□□□□ -0.21
CCNKO75909 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC13.75□□□□□ -0.21
CCNKO75909 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCNKO75909 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCNKO75909 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
CCNKO75909 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCNKO75909 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCNKO75909 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.75□□□□□ -0.21
CCNKO75909 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC13.75□□□□□ -0.21
CCNKO75909 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.75□□□□□ -0.21
CCNKO75909 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCNKO75909 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.74□□□□□ -0.21
CCNKO75909 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC13.74□□□□□ -0.21
CCNKO75909 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCNKO75909 ZBED1P1-201ENST00000502364 1930 ntBASIC13.74□□□□□ -0.21
CCNKO75909 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.74□□□□□ -0.21
CCNKO75909 AL353692.3-201ENST00000407031 1396 ntBASIC13.74□□□□□ -0.21
CCNKO75909 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCNKO75909 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCNKO75909 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CCNKO75909 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCNKO75909 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.74□□□□□ -0.21
CCNKO75909 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CCNKO75909 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCNKO75909 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCNKO75909 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCNKO75909 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CCNKO75909 IGHGP-201ENST00000390555 1178 ntBASIC13.74□□□□□ -0.21
CCNKO75909 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC13.74□□□□□ -0.21
CCNKO75909 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
CCNKO75909 DENND3-207ENST00000518347 850 ntTSL 2 BASIC13.74□□□□□ -0.21
CCNKO75909 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CCNKO75909 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC13.74□□□□□ -0.21
CCNKO75909 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC13.74□□□□□ -0.21
CCNKO75909 SNX21-213ENST00000614929 587 ntTSL 5 BASIC13.74□□□□□ -0.21
CCNKO75909 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
CCNKO75909 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CCNKO75909 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC13.74□□□□□ -0.21
CCNKO75909 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCNKO75909 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC13.74□□□□□ -0.21
CCNKO75909 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCNKO75909 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
CCNKO75909 C2-206ENST00000442278 2434 ntTSL 2 BASIC13.74□□□□□ -0.21
CCNKO75909 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.74□□□□□ -0.21
CCNKO75909 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC13.74□□□□□ -0.21
CCNKO75909 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
CCNKO75909 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCNKO75909 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CCNKO75909 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCNKO75909 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCNKO75909 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCNKO75909 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
CCNKO75909 AC019294.4-201ENST00000561777 2905 ntBASIC13.74□□□□□ -0.21
CCNKO75909 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CCNKO75909 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CCNKO75909 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC13.73□□□□□ -0.21
CCNKO75909 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
CCNKO75909 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.73□□□□□ -0.21
CCNKO75909 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCNKO75909 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCNKO75909 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCNKO75909 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCNKO75909 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCNKO75909 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCNKO75909 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms