Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LCMT2O60294 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LCMT2O60294 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
LCMT2O60294 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.1■□□□□ 0.01
LCMT2O60294 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.1■□□□□ 0.01
LCMT2O60294 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.1■□□□□ 0.01
LCMT2O60294 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.1■□□□□ 0.01
LCMT2O60294 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LCMT2O60294 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.1■□□□□ 0.01
LCMT2O60294 AC135586.1-201ENST00000539323 574 ntBASIC15.1■□□□□ 0.01
LCMT2O60294 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LCMT2O60294 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.1■□□□□ 0.01
LCMT2O60294 SPCS2P1-201ENST00000561636 679 ntBASIC15.1■□□□□ 0.01
LCMT2O60294 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.1■□□□□ 0.01
LCMT2O60294 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LCMT2O60294 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LCMT2O60294 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.1■□□□□ 0.01
LCMT2O60294 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
LCMT2O60294 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
LCMT2O60294 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.1■□□□□ 0.01
LCMT2O60294 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.1■□□□□ 0.01
LCMT2O60294 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LCMT2O60294 AC127383.1-201ENST00000444697 1800 ntBASIC15.1■□□□□ 0.01
LCMT2O60294 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.1■□□□□ 0.01
LCMT2O60294 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LCMT2O60294 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LCMT2O60294 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LCMT2O60294 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LCMT2O60294 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
LCMT2O60294 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LCMT2O60294 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.09■□□□□ 0.01
LCMT2O60294 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LCMT2O60294 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
LCMT2O60294 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
LCMT2O60294 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LCMT2O60294 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.09■□□□□ 0.01
LCMT2O60294 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
LCMT2O60294 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LCMT2O60294 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LCMT2O60294 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LCMT2O60294 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
LCMT2O60294 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
LCMT2O60294 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.09■□□□□ 0.01
LCMT2O60294 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LCMT2O60294 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.09■□□□□ 0.01
LCMT2O60294 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LCMT2O60294 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LCMT2O60294 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LCMT2O60294 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LCMT2O60294 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
LCMT2O60294 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LCMT2O60294 RAC2-204ENST00000406508 893 ntTSL 5 BASIC15.09■□□□□ 0.01
LCMT2O60294 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LCMT2O60294 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LCMT2O60294 HMGN1P19-201ENST00000436976 333 ntBASIC15.09■□□□□ 0.01
LCMT2O60294 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LCMT2O60294 BCRP1-201ENST00000444246 691 ntBASIC15.09■□□□□ 0.01
LCMT2O60294 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LCMT2O60294 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.09■□□□□ 0.01
LCMT2O60294 AL589987.1-201ENST00000453380 819 ntBASIC15.09■□□□□ 0.01
LCMT2O60294 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
LCMT2O60294 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.09■□□□□ 0.01
LCMT2O60294 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
LCMT2O60294 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.09■□□□□ 0.01
LCMT2O60294 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LCMT2O60294 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC15.09■□□□□ 0.01
LCMT2O60294 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC15.09■□□□□ 0.01
LCMT2O60294 AL096865.1-201ENST00000606796 927 ntBASIC15.09■□□□□ 0.01
LCMT2O60294 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.09■□□□□ 0.01
LCMT2O60294 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LCMT2O60294 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LCMT2O60294 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.09■□□□□ 0.01
LCMT2O60294 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LCMT2O60294 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.09■□□□□ 0.01
LCMT2O60294 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LCMT2O60294 AC090616.6-203ENST00000579186 1945 ntBASIC15.09■□□□□ 0.01
LCMT2O60294 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LCMT2O60294 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LCMT2O60294 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LCMT2O60294 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.09■□□□□ 0.01
LCMT2O60294 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LCMT2O60294 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LCMT2O60294 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LCMT2O60294 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
LCMT2O60294 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
LCMT2O60294 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.08■□□□□ 0.01
LCMT2O60294 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
LCMT2O60294 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LCMT2O60294 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
LCMT2O60294 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.08■□□□□ 0
LCMT2O60294 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
LCMT2O60294 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
LCMT2O60294 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.08■□□□□ 0
LCMT2O60294 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.08■□□□□ 0
LCMT2O60294 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.08■□□□□ 0
LCMT2O60294 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LCMT2O60294 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LCMT2O60294 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
LCMT2O60294 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.08■□□□□ 0
LCMT2O60294 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms