Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CXCL13O43927 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.14□□□□□ -0.15
CXCL13O43927 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CXCL13O43927 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.14□□□□□ -0.15
CXCL13O43927 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CXCL13O43927 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CXCL13O43927 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.13□□□□□ -0.15
CXCL13O43927 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CXCL13O43927 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.13□□□□□ -0.15
CXCL13O43927 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CXCL13O43927 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CXCL13O43927 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.13□□□□□ -0.15
CXCL13O43927 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CXCL13O43927 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CXCL13O43927 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CXCL13O43927 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CXCL13O43927 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CXCL13O43927 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CXCL13O43927 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CXCL13O43927 AC015922.1-201ENST00000421102 1152 ntBASIC14.13□□□□□ -0.15
CXCL13O43927 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CXCL13O43927 AC093004.1-201ENST00000508850 424 ntBASIC14.13□□□□□ -0.15
CXCL13O43927 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.13□□□□□ -0.15
CXCL13O43927 AC190387.1-201ENST00000551683 408 ntBASIC14.13□□□□□ -0.15
CXCL13O43927 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.13□□□□□ -0.15
CXCL13O43927 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.13□□□□□ -0.15
CXCL13O43927 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.13□□□□□ -0.15
CXCL13O43927 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.13□□□□□ -0.15
CXCL13O43927 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CXCL13O43927 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.13□□□□□ -0.15
CXCL13O43927 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CXCL13O43927 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CXCL13O43927 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
CXCL13O43927 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC14.13□□□□□ -0.15
CXCL13O43927 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CXCL13O43927 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC14.13□□□□□ -0.15
CXCL13O43927 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.13□□□□□ -0.15
CXCL13O43927 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.13□□□□□ -0.15
CXCL13O43927 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CXCL13O43927 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CXCL13O43927 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CXCL13O43927 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.12□□□□□ -0.15
CXCL13O43927 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.12□□□□□ -0.15
CXCL13O43927 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CXCL13O43927 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.12□□□□□ -0.15
CXCL13O43927 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CXCL13O43927 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.12□□□□□ -0.15
CXCL13O43927 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CXCL13O43927 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.12□□□□□ -0.15
CXCL13O43927 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CXCL13O43927 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CXCL13O43927 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CXCL13O43927 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CXCL13O43927 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CXCL13O43927 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC14.12□□□□□ -0.15
CXCL13O43927 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CXCL13O43927 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CXCL13O43927 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CXCL13O43927 AP005117.1-202ENST00000581724 1908 ntBASIC14.12□□□□□ -0.15
CXCL13O43927 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CXCL13O43927 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CXCL13O43927 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.12□□□□□ -0.15
CXCL13O43927 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CXCL13O43927 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CXCL13O43927 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CXCL13O43927 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CXCL13O43927 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.12□□□□□ -0.15
CXCL13O43927 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.12□□□□□ -0.15
CXCL13O43927 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.12□□□□□ -0.15
CXCL13O43927 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CXCL13O43927 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.12□□□□□ -0.15
CXCL13O43927 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.12□□□□□ -0.15
CXCL13O43927 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CXCL13O43927 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CXCL13O43927 TNRC18P3-201ENST00000441896 2691 ntBASIC14.12□□□□□ -0.15
CXCL13O43927 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CXCL13O43927 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CXCL13O43927 AC067930.6-201ENST00000623257 4947 ntBASIC14.12□□□□□ -0.15
CXCL13O43927 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CXCL13O43927 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CXCL13O43927 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CXCL13O43927 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CXCL13O43927 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.12□□□□□ -0.15
CXCL13O43927 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.11□□□□□ -0.15
CXCL13O43927 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CXCL13O43927 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
CXCL13O43927 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.11□□□□□ -0.15
CXCL13O43927 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CXCL13O43927 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CXCL13O43927 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CXCL13O43927 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CXCL13O43927 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CXCL13O43927 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CXCL13O43927 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CXCL13O43927 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CXCL13O43927 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.11□□□□□ -0.15
CXCL13O43927 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.11□□□□□ -0.15
CXCL13O43927 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.11□□□□□ -0.15
CXCL13O43927 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CXCL13O43927 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms