Protein–RNA interactions for Protein: O43405

COCH, Cochlin, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COCHO43405 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
COCHO43405 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
COCHO43405 MGST3-203ENST00000367885 680 ntTSL 2 BASIC16.21■□□□□ 0.19
COCHO43405 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
COCHO43405 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC16.21■□□□□ 0.19
COCHO43405 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COCHO43405 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC16.21■□□□□ 0.19
COCHO43405 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.21■□□□□ 0.19
COCHO43405 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC16.21■□□□□ 0.19
COCHO43405 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
COCHO43405 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.21■□□□□ 0.19
COCHO43405 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.21■□□□□ 0.19
COCHO43405 AC233724.13-201ENST00000598383 410 ntBASIC16.21■□□□□ 0.19
COCHO43405 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.21■□□□□ 0.19
COCHO43405 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC16.21■□□□□ 0.19
COCHO43405 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
COCHO43405 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
COCHO43405 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COCHO43405 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COCHO43405 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
COCHO43405 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
COCHO43405 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COCHO43405 AC018665.1-201ENST00000622927 1362 ntBASIC16.21■□□□□ 0.19
COCHO43405 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
COCHO43405 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.21■□□□□ 0.19
COCHO43405 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
COCHO43405 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
COCHO43405 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COCHO43405 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COCHO43405 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COCHO43405 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
COCHO43405 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
COCHO43405 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
COCHO43405 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.2■□□□□ 0.18
COCHO43405 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
COCHO43405 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.2■□□□□ 0.18
COCHO43405 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
COCHO43405 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
COCHO43405 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
COCHO43405 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
COCHO43405 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
COCHO43405 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
COCHO43405 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
COCHO43405 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
COCHO43405 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.2■□□□□ 0.18
COCHO43405 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
COCHO43405 MIR1909-201ENST00000411312 80 ntBASIC16.2■□□□□ 0.18
COCHO43405 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
COCHO43405 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC16.2■□□□□ 0.18
COCHO43405 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC16.2■□□□□ 0.18
COCHO43405 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.2■□□□□ 0.18
COCHO43405 AC022210.1-201ENST00000449856 793 ntBASIC16.2■□□□□ 0.18
COCHO43405 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC16.2■□□□□ 0.18
COCHO43405 GAPDHP40-201ENST00000505218 1006 ntBASIC16.2■□□□□ 0.18
COCHO43405 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
COCHO43405 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.2■□□□□ 0.18
COCHO43405 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
COCHO43405 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC16.2■□□□□ 0.18
COCHO43405 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
COCHO43405 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC16.2■□□□□ 0.18
COCHO43405 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
COCHO43405 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
COCHO43405 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
COCHO43405 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
COCHO43405 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
COCHO43405 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.2■□□□□ 0.18
COCHO43405 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
COCHO43405 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
COCHO43405 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.2■□□□□ 0.18
COCHO43405 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.2■□□□□ 0.18
COCHO43405 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
COCHO43405 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
COCHO43405 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC16.19■□□□□ 0.18
COCHO43405 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
COCHO43405 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.19■□□□□ 0.18
COCHO43405 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
COCHO43405 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.19■□□□□ 0.18
COCHO43405 AC026691.1-201ENST00000602502 2017 ntBASIC16.19■□□□□ 0.18
COCHO43405 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
COCHO43405 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
COCHO43405 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.19■□□□□ 0.18
COCHO43405 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
COCHO43405 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
COCHO43405 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
COCHO43405 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
COCHO43405 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
COCHO43405 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
COCHO43405 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.19■□□□□ 0.18
COCHO43405 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
COCHO43405 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC16.19■□□□□ 0.18
COCHO43405 AC234783.1-201ENST00000441761 496 ntBASIC16.19■□□□□ 0.18
COCHO43405 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC16.19■□□□□ 0.18
COCHO43405 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.19■□□□□ 0.18
COCHO43405 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
COCHO43405 AC068587.3-201ENST00000526613 355 ntBASIC16.19■□□□□ 0.18
COCHO43405 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.19■□□□□ 0.18
COCHO43405 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC16.19■□□□□ 0.18
COCHO43405 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC16.19■□□□□ 0.18
COCHO43405 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC16.19■□□□□ 0.18
COCHO43405 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms