Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.77■□□□□ 0.11
PHGDHO43175 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
PHGDHO43175 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PHGDHO43175 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
PHGDHO43175 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.77■□□□□ 0.11
PHGDHO43175 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
PHGDHO43175 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PHGDHO43175 KRT8P37-201ENST00000451609 1420 ntBASIC15.77■□□□□ 0.11
PHGDHO43175 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.77■□□□□ 0.11
PHGDHO43175 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PHGDHO43175 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PHGDHO43175 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PHGDHO43175 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PHGDHO43175 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PHGDHO43175 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PHGDHO43175 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.76■□□□□ 0.11
PHGDHO43175 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PHGDHO43175 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PHGDHO43175 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
PHGDHO43175 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PHGDHO43175 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PHGDHO43175 AP3S2-216ENST00000617003 1561 ntBASIC15.76■□□□□ 0.11
PHGDHO43175 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
PHGDHO43175 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PHGDHO43175 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.76■□□□□ 0.11
PHGDHO43175 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PHGDHO43175 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PHGDHO43175 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PHGDHO43175 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PHGDHO43175 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PHGDHO43175 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.76■□□□□ 0.11
PHGDHO43175 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PHGDHO43175 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.76■□□□□ 0.11
PHGDHO43175 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.76■□□□□ 0.11
PHGDHO43175 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
PHGDHO43175 AL139010.1-201ENST00000454878 894 ntBASIC15.76■□□□□ 0.11
PHGDHO43175 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.76■□□□□ 0.11
PHGDHO43175 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
PHGDHO43175 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC15.76■□□□□ 0.11
PHGDHO43175 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PHGDHO43175 AL450472.2-201ENST00000603663 1156 ntBASIC15.76■□□□□ 0.11
PHGDHO43175 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PHGDHO43175 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.76■□□□□ 0.11
PHGDHO43175 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.76■□□□□ 0.11
PHGDHO43175 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
PHGDHO43175 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PHGDHO43175 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PHGDHO43175 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PHGDHO43175 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
PHGDHO43175 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.76■□□□□ 0.11
PHGDHO43175 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PHGDHO43175 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.76■□□□□ 0.11
PHGDHO43175 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.76■□□□□ 0.11
PHGDHO43175 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PHGDHO43175 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PHGDHO43175 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PHGDHO43175 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PHGDHO43175 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.76■□□□□ 0.11
PHGDHO43175 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PHGDHO43175 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.76■□□□□ 0.11
PHGDHO43175 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
PHGDHO43175 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PHGDHO43175 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PHGDHO43175 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PHGDHO43175 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
PHGDHO43175 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
PHGDHO43175 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
PHGDHO43175 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PHGDHO43175 TCAF2P1-201ENST00000291129 2421 ntBASIC15.75■□□□□ 0.11
PHGDHO43175 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.75■□□□□ 0.11
PHGDHO43175 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PHGDHO43175 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.75■□□□□ 0.11
PHGDHO43175 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PHGDHO43175 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.75■□□□□ 0.11
PHGDHO43175 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PHGDHO43175 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.75■□□□□ 0.11
PHGDHO43175 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PHGDHO43175 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PHGDHO43175 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PHGDHO43175 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PHGDHO43175 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.75■□□□□ 0.11
PHGDHO43175 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.75■□□□□ 0.11
PHGDHO43175 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.75■□□□□ 0.11
PHGDHO43175 AL592309.1-201ENST00000443127 649 ntBASIC15.75■□□□□ 0.11
PHGDHO43175 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
PHGDHO43175 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.75■□□□□ 0.11
PHGDHO43175 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.75■□□□□ 0.11
PHGDHO43175 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.75■□□□□ 0.11
PHGDHO43175 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.75■□□□□ 0.11
PHGDHO43175 KRT8P23-201ENST00000560090 1207 ntBASIC15.75■□□□□ 0.11
PHGDHO43175 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.75■□□□□ 0.11
PHGDHO43175 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.75■□□□□ 0.11
PHGDHO43175 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
PHGDHO43175 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
PHGDHO43175 C20orf181-201ENST00000623918 480 ntBASIC15.75■□□□□ 0.11
PHGDHO43175 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
PHGDHO43175 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PHGDHO43175 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PHGDHO43175 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PHGDHO43175 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms