Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 NUDT4P2-201ENST00000578341 546 ntBASIC24.72■■□□□ 1.55
CHD1O14646 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
CHD1O14646 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC24.71■■□□□ 1.55
CHD1O14646 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
CHD1O14646 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CHD1O14646 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CHD1O14646 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CHD1O14646 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CHD1O14646 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC24.71■■□□□ 1.55
CHD1O14646 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC24.71■■□□□ 1.55
CHD1O14646 LINC00431-202ENST00000636375 159 ntBASIC24.71■■□□□ 1.55
CHD1O14646 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC24.71■■□□□ 1.55
CHD1O14646 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC24.71■■□□□ 1.55
CHD1O14646 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
CHD1O14646 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.55
CHD1O14646 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
CHD1O14646 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC24.7■■□□□ 1.54
CHD1O14646 NCR3-202ENST00000376071 541 ntTSL 5 BASIC24.7■■□□□ 1.54
CHD1O14646 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
CHD1O14646 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC24.7■■□□□ 1.54
CHD1O14646 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC24.7■■□□□ 1.54
CHD1O14646 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC24.7■■□□□ 1.54
CHD1O14646 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC24.7■■□□□ 1.54
CHD1O14646 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC24.7■■□□□ 1.54
CHD1O14646 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC24.7■■□□□ 1.54
CHD1O14646 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC24.7■■□□□ 1.54
CHD1O14646 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC24.7■■□□□ 1.54
CHD1O14646 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CHD1O14646 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
CHD1O14646 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC24.7■■□□□ 1.54
CHD1O14646 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CHD1O14646 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
CHD1O14646 RNF216P1-203ENST00000404404 2427 ntBASIC24.7■■□□□ 1.54
CHD1O14646 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.54
CHD1O14646 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.54
CHD1O14646 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CHD1O14646 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC24.7■■□□□ 1.54
CHD1O14646 AMT-239ENST00000636865 1914 ntTSL 5 BASIC24.7■■□□□ 1.54
CHD1O14646 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
CHD1O14646 AC005052.1-201ENST00000625181 2492 ntBASIC24.7■■□□□ 1.54
CHD1O14646 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CHD1O14646 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC24.69■■□□□ 1.54
CHD1O14646 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC24.69■■□□□ 1.54
CHD1O14646 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC24.69■■□□□ 1.54
CHD1O14646 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC24.69■■□□□ 1.54
CHD1O14646 AC092299.1-201ENST00000632679 757 ntBASIC24.69■■□□□ 1.54
CHD1O14646 KRT8P31-201ENST00000504812 1408 ntBASIC24.69■■□□□ 1.54
CHD1O14646 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
CHD1O14646 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CHD1O14646 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC24.69■■□□□ 1.54
CHD1O14646 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CHD1O14646 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC24.69■■□□□ 1.54
CHD1O14646 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CHD1O14646 MRPL37P1-201ENST00000592451 1337 ntBASIC24.69■■□□□ 1.54
CHD1O14646 STK16-203ENST00000409516 895 ntTSL 2 BASIC24.69■■□□□ 1.54
CHD1O14646 FTH1P22-201ENST00000456305 520 ntBASIC24.69■■□□□ 1.54
CHD1O14646 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC24.69■■□□□ 1.54
CHD1O14646 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC24.69■■□□□ 1.54
CHD1O14646 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC24.69■■□□□ 1.54
CHD1O14646 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC24.69■■□□□ 1.54
CHD1O14646 MME-218ENST00000625667 363 ntTSL 5 BASIC24.69■■□□□ 1.54
CHD1O14646 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CHD1O14646 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CHD1O14646 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC24.69■■□□□ 1.54
CHD1O14646 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CHD1O14646 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CHD1O14646 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
CHD1O14646 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
CHD1O14646 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CHD1O14646 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
CHD1O14646 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
CHD1O14646 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC24.68■■□□□ 1.54
CHD1O14646 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CHD1O14646 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CHD1O14646 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC24.68■■□□□ 1.54
CHD1O14646 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CHD1O14646 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC24.68■■□□□ 1.54
CHD1O14646 KRT18P36-201ENST00000411618 1276 ntBASIC24.68■■□□□ 1.54
CHD1O14646 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC24.68■■□□□ 1.54
CHD1O14646 AGPAT5P1-201ENST00000455855 1019 ntBASIC24.68■■□□□ 1.54
CHD1O14646 AC024293.1-201ENST00000467930 498 ntBASIC24.68■■□□□ 1.54
CHD1O14646 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
CHD1O14646 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC24.68■■□□□ 1.54
CHD1O14646 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC24.68■■□□□ 1.54
CHD1O14646 AC087392.5-201ENST00000612517 489 ntBASIC24.68■■□□□ 1.54
CHD1O14646 AC018695.6-201ENST00000614011 534 ntBASIC24.68■■□□□ 1.54
CHD1O14646 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
CHD1O14646 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC24.68■■□□□ 1.54
CHD1O14646 AC015909.3-201ENST00000572855 1794 ntBASIC24.68■■□□□ 1.54
CHD1O14646 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CHD1O14646 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
CHD1O14646 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CHD1O14646 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
CHD1O14646 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC24.67■■□□□ 1.54
CHD1O14646 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CHD1O14646 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
CHD1O14646 FAM86KP-201ENST00000509817 987 ntBASIC24.67■■□□□ 1.54
CHD1O14646 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC24.67■■□□□ 1.54
CHD1O14646 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC24.67■■□□□ 1.54
CHD1O14646 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms