Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
UPK1AO00322 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.99□□□□□ -0.01
UPK1AO00322 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.99□□□□□ -0.01
UPK1AO00322 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
UPK1AO00322 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
UPK1AO00322 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
UPK1AO00322 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
UPK1AO00322 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.99□□□□□ -0.01
UPK1AO00322 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
UPK1AO00322 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
UPK1AO00322 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
UPK1AO00322 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
UPK1AO00322 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
UPK1AO00322 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
UPK1AO00322 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
UPK1AO00322 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
UPK1AO00322 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
UPK1AO00322 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
UPK1AO00322 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
UPK1AO00322 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
UPK1AO00322 SPDYE14P-201ENST00000442619 822 ntBASIC14.99□□□□□ -0.01
UPK1AO00322 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.99□□□□□ -0.01
UPK1AO00322 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.99□□□□□ -0.01
UPK1AO00322 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
UPK1AO00322 AC023141.5-201ENST00000458585 616 ntBASIC14.99□□□□□ -0.01
UPK1AO00322 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.99□□□□□ -0.01
UPK1AO00322 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.99□□□□□ -0.01
UPK1AO00322 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.99□□□□□ -0.01
UPK1AO00322 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.99□□□□□ -0.01
UPK1AO00322 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.99□□□□□ -0.01
UPK1AO00322 AC018529.1-201ENST00000613063 361 ntBASIC14.99□□□□□ -0.01
UPK1AO00322 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
UPK1AO00322 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
UPK1AO00322 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
UPK1AO00322 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
UPK1AO00322 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
UPK1AO00322 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
UPK1AO00322 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC14.99□□□□□ -0.01
UPK1AO00322 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
UPK1AO00322 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.99□□□□□ -0.01
UPK1AO00322 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
UPK1AO00322 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
UPK1AO00322 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
UPK1AO00322 AC232323.1-201ENST00000540724 2099 ntBASIC14.99□□□□□ -0.01
UPK1AO00322 REXO1L5P-201ENST00000622260 2098 ntBASIC14.99□□□□□ -0.01
UPK1AO00322 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
UPK1AO00322 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
UPK1AO00322 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
UPK1AO00322 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
UPK1AO00322 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC14.98□□□□□ -0.01
UPK1AO00322 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
UPK1AO00322 CYP4F24P-201ENST00000586049 1580 ntBASIC14.98□□□□□ -0.01
UPK1AO00322 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.98□□□□□ -0.01
UPK1AO00322 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
UPK1AO00322 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
UPK1AO00322 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
UPK1AO00322 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
UPK1AO00322 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.98□□□□□ -0.01
UPK1AO00322 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.98□□□□□ -0.01
UPK1AO00322 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
UPK1AO00322 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
UPK1AO00322 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
UPK1AO00322 AC018892.3-201ENST00000623986 2499 ntBASIC14.98□□□□□ -0.01
UPK1AO00322 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
UPK1AO00322 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
UPK1AO00322 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
UPK1AO00322 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
UPK1AO00322 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
UPK1AO00322 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
UPK1AO00322 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
UPK1AO00322 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
UPK1AO00322 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
UPK1AO00322 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
UPK1AO00322 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
UPK1AO00322 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.98□□□□□ -0.01
UPK1AO00322 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.98□□□□□ -0.01
UPK1AO00322 CNN2P11-201ENST00000429351 262 ntBASIC14.98□□□□□ -0.01
UPK1AO00322 AC004967.1-201ENST00000453589 447 ntBASIC14.98□□□□□ -0.01
UPK1AO00322 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.98□□□□□ -0.01
UPK1AO00322 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.98□□□□□ -0.01
UPK1AO00322 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.98□□□□□ -0.01
UPK1AO00322 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
UPK1AO00322 AC026150.2-201ENST00000564693 1156 ntBASIC14.98□□□□□ -0.01
UPK1AO00322 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.98□□□□□ -0.01
UPK1AO00322 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
UPK1AO00322 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
UPK1AO00322 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
UPK1AO00322 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.98□□□□□ -0.01
UPK1AO00322 AC026979.3-201ENST00000607315 403 ntBASIC14.98□□□□□ -0.01
UPK1AO00322 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.98□□□□□ -0.01
UPK1AO00322 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.98□□□□□ -0.01
UPK1AO00322 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.98□□□□□ -0.01
UPK1AO00322 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
UPK1AO00322 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
UPK1AO00322 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.98□□□□□ -0.01
UPK1AO00322 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
UPK1AO00322 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
UPK1AO00322 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
UPK1AO00322 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.98□□□□□ -0.01
UPK1AO00322 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms