Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.42□□□□□ -0.1
NPIPA3F8WFD2 SLC7A15P-201ENST00000424028 1363 ntBASIC14.42□□□□□ -0.1
NPIPA3F8WFD2 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NPIPA3F8WFD2 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NPIPA3F8WFD2 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NPIPA3F8WFD2 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.42□□□□□ -0.1
NPIPA3F8WFD2 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NPIPA3F8WFD2 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NPIPA3F8WFD2 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NPIPA3F8WFD2 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
NPIPA3F8WFD2 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
NPIPA3F8WFD2 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NPIPA3F8WFD2 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.42□□□□□ -0.1
NPIPA3F8WFD2 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
NPIPA3F8WFD2 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NPIPA3F8WFD2 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC14.42□□□□□ -0.1
NPIPA3F8WFD2 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPA3F8WFD2 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
NPIPA3F8WFD2 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPA3F8WFD2 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPA3F8WFD2 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPA3F8WFD2 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPA3F8WFD2 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.41□□□□□ -0.1
NPIPA3F8WFD2 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPA3F8WFD2 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC14.41□□□□□ -0.1
NPIPA3F8WFD2 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
NPIPA3F8WFD2 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPA3F8WFD2 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
NPIPA3F8WFD2 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
NPIPA3F8WFD2 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.41□□□□□ -0.1
NPIPA3F8WFD2 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPA3F8WFD2 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.41□□□□□ -0.1
NPIPA3F8WFD2 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.41□□□□□ -0.1
NPIPA3F8WFD2 MEP1AP4-201ENST00000423244 1087 ntBASIC14.41□□□□□ -0.1
NPIPA3F8WFD2 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.41□□□□□ -0.1
NPIPA3F8WFD2 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.41□□□□□ -0.1
NPIPA3F8WFD2 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.41□□□□□ -0.1
NPIPA3F8WFD2 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPA3F8WFD2 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.41□□□□□ -0.1
NPIPA3F8WFD2 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.41□□□□□ -0.1
NPIPA3F8WFD2 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.41□□□□□ -0.1
NPIPA3F8WFD2 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPA3F8WFD2 AC243562.2-201ENST00000561247 970 ntBASIC14.41□□□□□ -0.1
NPIPA3F8WFD2 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.41□□□□□ -0.1
NPIPA3F8WFD2 WASH4P-201ENST00000564273 1246 ntBASIC14.41□□□□□ -0.1
NPIPA3F8WFD2 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.41□□□□□ -0.1
NPIPA3F8WFD2 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC14.41□□□□□ -0.1
NPIPA3F8WFD2 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.41□□□□□ -0.1
NPIPA3F8WFD2 AC074044.1-201ENST00000609673 707 ntBASIC14.41□□□□□ -0.1
NPIPA3F8WFD2 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPA3F8WFD2 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPA3F8WFD2 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.41□□□□□ -0.1
NPIPA3F8WFD2 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.41□□□□□ -0.1
NPIPA3F8WFD2 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.41□□□□□ -0.1
NPIPA3F8WFD2 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.41□□□□□ -0.1
NPIPA3F8WFD2 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPA3F8WFD2 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.41□□□□□ -0.1
NPIPA3F8WFD2 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC14.41□□□□□ -0.1
NPIPA3F8WFD2 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPA3F8WFD2 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPA3F8WFD2 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPA3F8WFD2 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPA3F8WFD2 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
NPIPA3F8WFD2 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
NPIPA3F8WFD2 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
NPIPA3F8WFD2 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPA3F8WFD2 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPA3F8WFD2 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPA3F8WFD2 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.41□□□□□ -0.1
NPIPA3F8WFD2 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPA3F8WFD2 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPA3F8WFD2 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.4□□□□□ -0.1
NPIPA3F8WFD2 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.1
NPIPA3F8WFD2 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPA3F8WFD2 PCDHA1-201ENST00000378133 2726 ntBASIC14.4□□□□□ -0.1
NPIPA3F8WFD2 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
NPIPA3F8WFD2 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
NPIPA3F8WFD2 AP001282.1-201ENST00000531301 1499 ntBASIC14.4□□□□□ -0.1
NPIPA3F8WFD2 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPA3F8WFD2 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
NPIPA3F8WFD2 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPA3F8WFD2 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.1
NPIPA3F8WFD2 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPA3F8WFD2 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.4□□□□□ -0.1
NPIPA3F8WFD2 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPA3F8WFD2 OR8S1-201ENST00000310194 1080 ntBASIC14.4□□□□□ -0.1
NPIPA3F8WFD2 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
NPIPA3F8WFD2 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPA3F8WFD2 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.4□□□□□ -0.1
NPIPA3F8WFD2 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.4□□□□□ -0.1
NPIPA3F8WFD2 INE1-201ENST00000456273 945 ntBASIC14.4□□□□□ -0.1
NPIPA3F8WFD2 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.4□□□□□ -0.1
NPIPA3F8WFD2 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.4□□□□□ -0.1
NPIPA3F8WFD2 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.4□□□□□ -0.1
NPIPA3F8WFD2 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.4□□□□□ -0.1
NPIPA3F8WFD2 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.4□□□□□ -0.1
NPIPA3F8WFD2 AC025048.3-201ENST00000590609 569 ntBASIC14.4□□□□□ -0.1
NPIPA3F8WFD2 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPA3F8WFD2 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPA3F8WFD2 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms