Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 RCC2P8-201ENST00000502779 1035 ntBASIC18■□□□□ 0.47
TMEM88BA6NKF7 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC18■□□□□ 0.47
TMEM88BA6NKF7 TPM1-223ENST00000560445 485 ntTSL 3 BASIC18■□□□□ 0.47
TMEM88BA6NKF7 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC18■□□□□ 0.47
TMEM88BA6NKF7 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC18■□□□□ 0.47
TMEM88BA6NKF7 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC18■□□□□ 0.47
TMEM88BA6NKF7 AC007718.1-201ENST00000621078 280 ntBASIC18■□□□□ 0.47
TMEM88BA6NKF7 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC18■□□□□ 0.47
TMEM88BA6NKF7 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18■□□□□ 0.47
TMEM88BA6NKF7 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
TMEM88BA6NKF7 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
TMEM88BA6NKF7 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC18■□□□□ 0.47
TMEM88BA6NKF7 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18■□□□□ 0.47
TMEM88BA6NKF7 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC18■□□□□ 0.47
TMEM88BA6NKF7 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC18■□□□□ 0.47
TMEM88BA6NKF7 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18■□□□□ 0.47
TMEM88BA6NKF7 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TMEM88BA6NKF7 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC18■□□□□ 0.47
TMEM88BA6NKF7 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
TMEM88BA6NKF7 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC18■□□□□ 0.47
TMEM88BA6NKF7 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC18■□□□□ 0.47
TMEM88BA6NKF7 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.99■□□□□ 0.47
TMEM88BA6NKF7 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TMEM88BA6NKF7 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TMEM88BA6NKF7 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.99■□□□□ 0.47
TMEM88BA6NKF7 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC17.99■□□□□ 0.47
TMEM88BA6NKF7 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
TMEM88BA6NKF7 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
TMEM88BA6NKF7 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.99■□□□□ 0.47
TMEM88BA6NKF7 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.99■□□□□ 0.47
TMEM88BA6NKF7 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
TMEM88BA6NKF7 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TMEM88BA6NKF7 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
TMEM88BA6NKF7 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TMEM88BA6NKF7 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
TMEM88BA6NKF7 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TMEM88BA6NKF7 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TMEM88BA6NKF7 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC17.99■□□□□ 0.47
TMEM88BA6NKF7 NAGK-204ENST00000443872 878 ntTSL 3 BASIC17.99■□□□□ 0.47
TMEM88BA6NKF7 AC018463.1-201ENST00000456674 917 ntBASIC17.99■□□□□ 0.47
TMEM88BA6NKF7 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC17.99■□□□□ 0.47
TMEM88BA6NKF7 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TMEM88BA6NKF7 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC17.99■□□□□ 0.47
TMEM88BA6NKF7 AC100827.2-201ENST00000563214 1194 ntBASIC17.99■□□□□ 0.47
TMEM88BA6NKF7 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TMEM88BA6NKF7 MIR6858-201ENST00000620733 67 ntBASIC17.99■□□□□ 0.47
TMEM88BA6NKF7 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TMEM88BA6NKF7 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TMEM88BA6NKF7 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TMEM88BA6NKF7 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TMEM88BA6NKF7 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.99■□□□□ 0.47
TMEM88BA6NKF7 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TMEM88BA6NKF7 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
TMEM88BA6NKF7 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.99■□□□□ 0.47
TMEM88BA6NKF7 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TMEM88BA6NKF7 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TMEM88BA6NKF7 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TMEM88BA6NKF7 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.99■□□□□ 0.47
TMEM88BA6NKF7 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC17.99■□□□□ 0.47
TMEM88BA6NKF7 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.99■□□□□ 0.47
TMEM88BA6NKF7 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
TMEM88BA6NKF7 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.99■□□□□ 0.47
TMEM88BA6NKF7 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.98■□□□□ 0.47
TMEM88BA6NKF7 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM88BA6NKF7 KRT8P14-201ENST00000414254 1442 ntBASIC17.98■□□□□ 0.47
TMEM88BA6NKF7 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.98■□□□□ 0.47
TMEM88BA6NKF7 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.98■□□□□ 0.47
TMEM88BA6NKF7 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.98■□□□□ 0.47
TMEM88BA6NKF7 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.98■□□□□ 0.47
TMEM88BA6NKF7 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM88BA6NKF7 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.98■□□□□ 0.47
TMEM88BA6NKF7 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM88BA6NKF7 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM88BA6NKF7 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC17.98■□□□□ 0.47
TMEM88BA6NKF7 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC17.98■□□□□ 0.47
TMEM88BA6NKF7 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC17.98■□□□□ 0.47
TMEM88BA6NKF7 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC17.98■□□□□ 0.47
TMEM88BA6NKF7 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC17.98■□□□□ 0.47
TMEM88BA6NKF7 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC17.98■□□□□ 0.47
TMEM88BA6NKF7 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC17.98■□□□□ 0.47
TMEM88BA6NKF7 AC007881.3-201ENST00000608897 607 ntBASIC17.98■□□□□ 0.47
TMEM88BA6NKF7 ETV2-207ENST00000619399 994 ntTSL 5 BASIC17.98■□□□□ 0.47
TMEM88BA6NKF7 AL161773.1-201ENST00000624845 863 ntBASIC17.98■□□□□ 0.47
TMEM88BA6NKF7 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
TMEM88BA6NKF7 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.98■□□□□ 0.47
TMEM88BA6NKF7 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC17.98■□□□□ 0.47
TMEM88BA6NKF7 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM88BA6NKF7 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
TMEM88BA6NKF7 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM88BA6NKF7 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM88BA6NKF7 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
TMEM88BA6NKF7 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM88BA6NKF7 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM88BA6NKF7 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM88BA6NKF7 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM88BA6NKF7 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM88BA6NKF7 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM88BA6NKF7 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM88BA6NKF7 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM88BA6NKF7 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms